Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0314 ATGTTGGAAATGGATAAGGAGCTAAAGGATTTACAATTTGGTTCACCAAATCATCGAGACTTGCTTCATTTATGTCTCTCTTCTCCCAATTGCAATAGTGACACTTGTTTTCTGGAATCATCCCCTGCTACAGAGAAAATAAAATCGCAAATTAGCTCGAAAAATGGAATCTGGACAGAAGAAGAGGATAATCTTTTGATTGAGATAGTCAAGATGCACGACGGAAGCATCTGGAAAAGTATAGGCGGATGCGCTGCATACTTCCCTGGACGAACAGACATCGAATGCTTCCATCGCTGGCAAAAGGTTTCGAATCATGATCTTGTAAAAAGATCATGGACAAAGGAGGAGGATGAGGCCTTGATTGAGCTAGTAAGAAAGTATGGTTTCAAGAGATGGTCTTTTATAGCAAAATCCATGCCAGGTCGTATCGGAAAGCAATGTCGTGAGAGGTGGCATAATAACCTTGATCCCGTTATAAAAAAGGGTGCTTGGACGGAGGAGGAGGAGTCAATACTTGCTCACTACTACCAAATATATGGCAGTAAATGGTCAGAAATTGCAAGGGTTCTTCCTGGAAGGAGTGACAATGCTATAAAAAATCATTGGAACAGCTCAATGAAGAAGAAGTCATCAGCATCACCTACTAGGTGTGACATGGATGTTTCCACTTCCAGTTTCTGCTCTTCTCTAATAAAGCCAGCACATGATTCAGTTAAAGCTGAAGATCAAAGTTTAATTGGAATGGTTTCTCCCAAGCAAAGTAACTGGTTGAATCAGAATGCTGATAACTTCCCAACTCGAATGGCTATTCAAAATGCTTCCGTTGAGGAATTTTGGTCTGATATAAACATTTTTGGTGTGGCAACTCGTAGGGCCTCAGAAAAAAGTGAAAGAAGATCAGTTAATTTACCAAATTTGATGGAGACAGCTATAAGTTGCAAAGACCATGCCAACCTTACCTTCGCAGATAAACACATGAACTCATCGATGGATATGCTTGCAACAAATATGGATTGTTTCCCTTCTTCCAGTACTGTTACTTACGAGGCCTATAATTCTCCCAAATGGCAAAAGGCTTCTTTTTCAGAATCAAAGTTTATTGCTGGTAATGAATCTGATAGTTCCTATTCGAACTACTTAAAATTGGCTAATCATGAGAAGAAAGTTCAAGTTGGAATGGAAAGCAATAACAAAAGCGACATGAGCCCAGAATCGGTACTAAGAAACTTAGCAATGACCTATGAAAACATTCCTTCTATTATAAGGAAAAGATCTTCTAAGAAGGCATGTGCTGCCAAATATGGCAAGTCGAAAACACCTTCTGGAATGGTTAACTCAACTCCTGAAGCAGGATGTGTAATTGGTTTCGATAATTTAAAACTCAACCAAGGATTTGTTCCATTCCTTCATAGAAATGCCATGGAATGA 1431 0.3934 MLEMDKELKDLQFGSPNHRDLLHLCLSSPNCNSDTCFLESSPATEKIKSQISSKNGIWTEEEDNLLIEIVKMHDGSIWKSIGGCAAYFPGRTDIECFHRWQKVSNHDLVKRSWTKEEDEALIELVRKYGFKRWSFIAKSMPGRIGKQCRERWHNNLDPVIKKGAWTEEEESILAHYYQIYGSKWSEIARVLPGRSDNAIKNHWNSSMKKKSSASPTRCDMDVSTSSFCSSLIKPAHDSVKAEDQSLIGMVSPKQSNWLNQNADNFPTRMAIQNASVEEFWSDINIFGVATRRASEKSERRSVNLPNLMETAISCKDHANLTFADKHMNSSMDMLATNMDCFPSSSTVTYEAYNSPKWQKASFSESKFIAGNESDSSYSNYLKLANHEKKVQVGMESNNKSDMSPESVLRNLAMTYENIPSIIRKRSSKKACAAKYGKSKTPSGMVNSTPEAGCVIGFDNLKLNQGFVPFLHRNAME* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0314 476 Gene3D - 110 161 - -
Mtr5g0314 476 Gene3D - 163 226 - -
Mtr5g0314 476 PANTHER MYB PROTEIN-RELATED 53 288 - -
Mtr5g0314 476 Pfam Myb-like DNA-binding domain 58 102 IPR001005 -
Mtr5g0314 476 ProSiteProfiles Myb-like domain profile. 105 156 IPR001005 -
Mtr5g0314 476 PANTHER TRANSCRIPTION REPRESSOR MYB5 53 288 - -
Mtr5g0314 476 Gene3D - 54 109 - -
Mtr5g0314 476 ProSiteProfiles Myb-like domain profile. 50 104 IPR001005 -
Mtr5g0314 476 Pfam Myb-like DNA-binding domain 113 171 - -
Mtr5g0314 476 SUPERFAMILY Homeodomain-like 107 203 IPR009057 -
Mtr5g0314 476 CDD SANT 58 103 IPR001005 -
Mtr5g0314 476 ProSiteProfiles Myb-like domain profile. 157 207 IPR001005 -
Mtr5g0314 476 CDD SANT 112 156 IPR001005 -
Mtr5g0314 476 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 103 IPR017930 -
Mtr5g0314 476 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 160 IPR017930 -
Mtr5g0314 476 SMART sant 109 158 IPR001005 -
Mtr5g0314 476 SMART sant 161 209 IPR001005 -
Mtr5g0314 476 SMART sant 54 106 IPR001005 -
Mtr5g0314 476 SUPERFAMILY Homeodomain-like 51 108 IPR009057 -
Mtr5g0314 476 CDD SANT 164 204 IPR001005 -
Mtr5g0314 476 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 161 211 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0314 Mtr-Chr5 2915071 2918618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0314 51 428 MYB Transcription Factor Family AT3G09370 38.035 2.78e-67 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr5g0314 Myb_DNA-bind_6 6.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0314 - - cam:101501970 584.719