Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0303 ATGAAATTTTTAGCTTCTTTTTTGGTTCTCTCTTTGATTTCAACAATCTCTCTTGTGAACTCAGACACTCTACCCTCAAATGAAGTTTGGGCACTTACAAGCTTTAAAGAAGCAATTTATGAAGACCCAAATTTGGTTTTATCAAATTGGAATATGCTTGAATCAGATCTTTGTAACTGGTTTGGTGTATCATGCACTCTGGCTGGAGATCATGTCATCAAGTTAAACATCTCAGGTTCATCGTTAAAAGGGTTTCTTGCAAAGGAATTAGGCCAAATTACCTATTTGGAAGAATTAATTTTGCATGGGAACAATTTAATTGGAACTATACCTAAAGAACTATGTGTGTTGAAATCTCTAGAGGTGTTGGATTTGGGAATGAATCAGTTAACAGGACCGATTCCACCGGAGATTGGAAATTTAGCTCTACTTGTGAACATAAACCTGCAGTCCAATGGGTTGACTGGTAGGATACCTCATGAGTTTGGAAATTTGAGATACCTTAAAGAACTTCGGCTCGATAGGAATAAGTTTCAAGGACCGGTTCCTGCTAGTGGAAGTTCTAATTTTGCTTCAAATACGCATGGAATGTATGCATCAAACGAGAATGTAACTGGCATCTGTCGTTCTCCTCAGTTAGAAGTAGCAGACTTTTCATATAATTTTTTAGTTGGTAGTATACCTAAATGCTTGGAGTTTCTCCCAAGGTTAAATTTTCAAGGAAACTGCCTCCAGAGCAATGATCCAAAGCAGCGGCCTTCCACACAATGTGGCGGTGCCTCACCTGCCAAGAGTCAGCCAGTGGTGGACCACCAATTCCACCAACTAGGTAATCATGTGCGCAAGCATCACGGATTATCAGAACCTACTTGGCTTTTGGCTCTAGAAATAGTAGCAGGAACTATGGTCGGTTCTGTCTGTTTGATTGCCATTCTCGCTGCTTTTCAAAGATGCAATAACAAATCATCTATCATTATTCCTTGGAAAAAGTCTGCCAGCCAGAAATATCACACTGCTGTGTACATAGACCCGGAGATATTAAAGGACGTGAGAAGGTATAGCAGACAGGAGCTTGAAGAGGCTTGCGAAGACTTCAGCAACATAATTGGGTCCTCTCCAGACAGTGTGGTGTACAAGGGAACCATGAAAGGTGGACCTGAGATTGCTGTAATTTCTCTCTGCATCAAGGAGGAGCACTGGACAGGATATCTGGAACTTTACTTTCAGAGAGAGGTGGCAGAATTAGCAAGGTTAAATCATGAGAATACTGGAAAACTACTGGGATATTGTAGAGAGAGCAATCCGTTTTCAAGGATGTTGGTTTTTGATTATGCTTCAAATGGGACACTTCATGAGCACCTACATTGTTACGAAGAAGGATGCCAATTCTCATGGACACGGCGTATGAAAATTATCATAGGCATTGCACGTGGACTCAAGTATTTGCACACGGAAGTTGAACCTCCATTCACTATCTCAGAGCTGAACTCTAGTGCTGTATACCTTACAGAAGAATTTGCCCCTAAGTTGGTTGATTTTGAAAGCTGGAAGACAATTCTTGAAAGATCAGAAAAGAATTCTGGTTCTATTAGCAGCCAAGGTGCTGTTTGTGTTCTTCCGAACTCCCTTGAGGCACGCCATCTGGATACCAAAGGAAACATACATGCTTTTGGAGTACTTCTACTAGAGATAATCAGTGGGCGACCTCCATATTGTAAGGAAAAAGGTTACTTGGTGGATTGGGCCAAAGACTATCTTGAAAAGCCAGAAGTAATGTCGCATTTGGTGAATTCAGAATTGAAAAATTATAGACATGATGACCTCAAAGTGATATGCGAGGTGATAACTCTTTGTATCAATCCCGATACAACTGTGCGTCCATCTATGCAAGAATTGTGCAGCATGCTGGAGAGCAGAATCGACACATCAGTAAGCGCGGATCTCAAGTCATCTTTGGCCTGGGCTGAACTTGCTCTTTTAGCATAA 1986 0.4119 MKFLASFLVLSLISTISLVNSDTLPSNEVWALTSFKEAIYEDPNLVLSNWNMLESDLCNWFGVSCTLAGDHVIKLNISGSSLKGFLAKELGQITYLEELILHGNNLIGTIPKELCVLKSLEVLDLGMNQLTGPIPPEIGNLALLVNINLQSNGLTGRIPHEFGNLRYLKELRLDRNKFQGPVPASGSSNFASNTHGMYASNENVTGICRSPQLEVADFSYNFLVGSIPKCLEFLPRLNFQGNCLQSNDPKQRPSTQCGGASPAKSQPVVDHQFHQLGNHVRKHHGLSEPTWLLALEIVAGTMVGSVCLIAILAAFQRCNNKSSIIIPWKKSASQKYHTAVYIDPEILKDVRRYSRQELEEACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAELARLNHENTGKLLGYCRESNPFSRMLVFDYASNGTLHEHLHCYEEGCQFSWTRRMKIIIGIARGLKYLHTEVEPPFTISELNSSAVYLTEEFAPKLVDFESWKTILERSEKNSGSISSQGAVCVLPNSLEARHLDTKGNIHAFGVLLLEIISGRPPYCKEKGYLVDWAKDYLEKPEVMSHLVNSELKNYRHDDLKVICEVITLCINPDTTVRPSMQELCSMLESRIDTSVSADLKSSLAWAELALLA* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0303 661 Gene3D Ribonuclease Inhibitor 27 140 IPR032675 -
Mtr5g0303 661 Pfam Protein tyrosine and serine/threonine kinase 367 636 IPR001245 GO:0004672|GO:0006468
Mtr5g0303 661 Gene3D Phosphorylase Kinase; domain 1 339 444 - -
Mtr5g0303 661 PANTHER PROTEIN MALE DISCOVERER 2 8 659 - -
Mtr5g0303 661 Gene3D Ribonuclease Inhibitor 141 278 IPR032675 -
Mtr5g0303 661 Gene3D Transferase(Phosphotransferase) domain 1 445 651 - -
Mtr5g0303 661 MobiDBLite consensus disorder prediction 245 265 - -
Mtr5g0303 661 ProSiteProfiles Protein kinase domain profile. 363 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0303 661 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 659 - -
Mtr5g0303 661 SUPERFAMILY L domain-like 26 241 - -
Mtr5g0303 661 MobiDBLite consensus disorder prediction 245 262 - -
Mtr5g0303 661 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Mtr5g0303 661 SUPERFAMILY Protein kinase-like (PK-like) 344 637 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0303 Mtr-Chr5 2813467 2817413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0303 7 642 Receptor kinase-like Gene Family AT2G35620 27.871 5.77e-53 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mtr5g0303 PK_Tyr_Ser-Thr 1.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0303 - - gmx:100794714 1089.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0303 5 2813467 2817413 Mtr5g0303 5 2813467 2817413 ECH
Mtr5g0303 5 2813467 2817413 Mtr8g3440 8 44979600 44984140 PCT