Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0278 ATGATCATTACTGAGAAAAATCGTAGAGAGATCTGCAAATACCTCTTTCAAGAGGGAGTTTGCTATGCAAAGAAGGATTTCAATTTGGCTAAGCACCCAGAAATTGATGTGCCAAATCTGCAAGTGATTAAGCTGATGCAGAGCTTCAAATCTAGGGAATATGTGAGGGAAACTTTTGCTTGGATGAACTATTACTGGTTCCTTACCAATGATGGAATTGAGTTTCTCAGGACTTATTTGAATCTTCCATCTGAGATTGTTCCTGCTACTTTGAAGAAGCAGGCTAAGCCAGCTGGAAGGCCCTTTGGTGGTCCTCCTGGTGATCGCCCTAGGGGCCCACCAAGATTTGATGGAGAAAGGAGATTTGGTGGTGACCGTGATGGATACCGTGGAGGCCCTAGAGGACCTGCTGGTGAATTTGGAGGAGACAAAGGTGGAGCTCCAGCTGACTACAGGCCTTCTTTTGGGGGCCCTGGTGGTAGACCTGGCTTCGGTCGTGGTTCTGGTGGCTTTGGAGCACCAACTAGTTCAAACGATGCTTAA 543 0.4696 MIITEKNRREICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMNYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFDGERRFGGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNDA* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0278 180 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 178 - -
Mtr5g0278 180 MobiDBLite consensus disorder prediction 91 180 - -
Mtr5g0278 180 Pfam Plectin/S10 domain 3 94 IPR005326 -
Mtr5g0278 180 PANTHER 40S RIBOSOMAL PROTEIN S10 1 178 IPR037447 -
Mtr5g0278 180 MobiDBLite consensus disorder prediction 112 128 - -
Mtr5g0278 180 Gene3D - 1 104 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0278 Mtr-Chr5 2615604 2618586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0278 1 155 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 80.000 3.17e-74 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0278 K02947 - gmx:100500445 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0278 5 2615604 2618586 Mtr5g0278 5 2615604 2618586 ECH
Mtr5g0278 5 2615604 2618586 Mtr8g3497 8 45470238 45472088 PCT