Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0258 ATGGGTAATTTTGTTCCAAACATTTTTTTGTTTTCAGTTTACTTGATTGGTTTGTTAGTATATCTAGGAAATGCTGAACCTTTTGAAGACAAAAAAGCATTGTTAGAGTTTGTTCAAAAATTACCACCTTTTAAGCCTTTGAATTGGAATGTGAATTCTTCAATTTGTACTAGTTGGAATGGTGTAATTTGTAGTGAAGATAGGTCTCAAATTATCGCGATTCGGTTGCCAGGGTTTGGATTTAATGGTACAATTCCTGCTAATACAATTAGTAAAATCAAAGGGTTGCAAAAATTGAGCCTTAGATCCAACAATATCATAGGTCCATTGCCAGATTTTGCTGTTTGGAAGAATTTATCTGTTGTTAATTTGTCTAATAACCGTTTCATTGGTGAAATTCCTTTATCTCTTTCCAATTTGAGTCACCTTGTTTATTTGAATCTCGCAAACAACTCGCTTTCCGGTGAAATTCCTGATATAAGCTTGCCATTGTTGAAACAGTTGAATTTGGCTAACAACAATTTGCAAGGGGTTGTTCCTGTTTCTTTTCAGAGGTTTCCTAAGTCAGCATTTGTTGGAAACAATGTTTCTATTGGTACATTGTCTCCGGTAACTCTACCTTGTTCCAAACATTGTTCTAAATCTGAGAAACATGGAAGGATTGGTGGAACAGTAATGTTGGGTATTATTGTTGTTGGTAGTTTTCTATGCCTTGCAGCATTCATTGTTTTTATCTTTGTGTTGTGTTCTAAAAAGAAGAATGGAGATGTTTTTGTTGGCAAGTTGGAGAAAGGAGGAAAAATGTCTCCTGAAAAAGTGGTCTCAAGAAACCAAGATGCAAATAATAAGCTTTTTTTCTTTGAGGGATGTAACTATGCTTTTGATTTGGAGGATTTATTAAGGGCTTCTGCTGAGGTACTTGGTAAGGGAACATTTGGTGCTGCGTACAAGGCGGTATTAGAGGATGCAACCACAGTTGTTGTGAAGAGGTTAAAGGAGGTAGCTGTTGGGAAGAAGGATTTTGAGCAACACATGGATATTGTTGGAAGTCTTAAACATGAGAATGTGGTTGAGCTAAAGGCATATTACTATTCCAAAGATGAGAAACTGGTTGTGTATGACTATTTCAGTCAGGGTAGCATCTCTGCTTTGTTGCATGGTAAAAGAGGAGAGGACAGGGTGGCTTTAGATTGGAATACTCGGATCAAACTAGCTTTAGGTGCTGCACGAGGCCTTGCTCATATCCATTCCAAAAATGGTGGAAAACTTGTACATGGCAATGTCAAATCCTCAAATATCTTTCTTAACACTAAGCAATACGGGTGTGTTTCTGATCTTGGCTTGGCAACCATAATGAGCTCAGTCGTCCAGCCCATCTCACGAGCATCCGGATACCGAGCACCAGAAGTTACAGACACCAGGAAAGCCACACAGCCTTCAGATGTTTACAGCTTTGGTGTGGTGTTACTAGAGCTTTTAACCGGTAAATCACCTATTCACACAACTAGAGGGGATGAGATTGTCCACCTTGTGAGATGGGTTCATTCAGTTGTGAGAGAGGAGTGGACAGCTGAAGTATTTGACTTAGAGCTTATGCGATGTCCTAATATAGAAGAAGAGATGGTAGAGATGTTACAGATAGCCATGTCATGTGCTACAAGGATGCCTGATCAAAGACCTATGATGTCAGAAATTGTAAAGATGATAGAAAATGTAAGGCAGCTTGATATAGAGAATCGGCCATCATCTGAGAACCAAGCTGAAAGTGCAGCACAGCACCAAATCTCTCAACCTGAAAGTCCACCCCCTACCCAAGAAGGAGGTGACTTATAG 1833 0.3917 MGNFVPNIFLFSVYLIGLLVYLGNAEPFEDKKALLEFVQKLPPFKPLNWNVNSSICTSWNGVICSEDRSQIIAIRLPGFGFNGTIPANTISKIKGLQKLSLRSNNIIGPLPDFAVWKNLSVVNLSNNRFIGEIPLSLSNLSHLVYLNLANNSLSGEIPDISLPLLKQLNLANNNLQGVVPVSFQRFPKSAFVGNNVSIGTLSPVTLPCSKHCSKSEKHGRIGGTVMLGIIVVGSFLCLAAFIVFIFVLCSKKKNGDVFVGKLEKGGKMSPEKVVSRNQDANNKLFFFEGCNYAFDLEDLLRASAEVLGKGTFGAAYKAVLEDATTVVVKRLKEVAVGKKDFEQHMDIVGSLKHENVVELKAYYYSKDEKLVVYDYFSQGSISALLHGKRGEDRVALDWNTRIKLALGAARGLAHIHSKNGGKLVHGNVKSSNIFLNTKQYGCVSDLGLATIMSSVVQPISRASGYRAPEVTDTRKATQPSDVYSFGVVLLELLTGKSPIHTTRGDEIVHLVRWVHSVVREEWTAEVFDLELMRCPNIEEEMVEMLQIAMSCATRMPDQRPMMSEIVKMIENVRQLDIENRPSSENQAESAAQHQISQPESPPPTQEGGDL* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0258 610 PANTHER OS05G0588300 PROTEIN 22 585 - -
Mtr5g0258 610 Pfam Protein kinase domain 304 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0258 610 SUPERFAMILY Protein kinase-like (PK-like) 305 579 IPR011009 -
Mtr5g0258 610 MobiDBLite consensus disorder prediction 578 610 - -
Mtr5g0258 610 ProSitePatterns Protein kinases ATP-binding region signature. 307 338 IPR017441 GO:0005524
Mtr5g0258 610 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Mtr5g0258 610 ProSiteProfiles Protein kinase domain profile. 301 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0258 610 Gene3D Phosphorylase Kinase; domain 1 251 375 - -
Mtr5g0258 610 PANTHER PROTEIN, PUTATIVE-RELATED 22 585 - -
Mtr5g0258 610 Gene3D Transferase(Phosphotransferase) domain 1 376 597 - -
Mtr5g0258 610 MobiDBLite consensus disorder prediction 578 603 - -
Mtr5g0258 610 Gene3D Ribonuclease Inhibitor 28 206 IPR032675 -
Mtr5g0258 610 SUPERFAMILY L domain-like 40 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0258 Mtr-Chr5 2398366 2401599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0258 19 599 Receptor kinase-like Gene Family AT4G23740 57.903 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr5g0258 Pkinase 1.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0258 - - gmx:100804799 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0258 5 2398366 2401599 Mtr5g0258 5 2398366 2401599 ECH
Mtr5g0258 5 2398366 2401599 Mtr8g3525 8 45865696 45869349 PCT