Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0256 ATGGAACAGCTCCGGCACATTGGTGAGGTTCTTGGAAGTCTAAAAGCGCTAATGGTTTTAAGCGACGAAATTCAAATCAATCAACGACAATGTTGTTTGCTCCACGACATATTTACTCTAGCATTCGATACAATCGCAGATGAGATAAGGCAGAATCTGAAGCTTGAAGACAGAACTACAAAATGGAAGCCTCTTGAATGTCCTCTTAGAGAGCTATCAAGGGTTTTCAAAGAAGGCGAACTATACATTAAGCATTGTTTGGATTCAAAAGATTGGTCAGGAAAAGCACTCACACTTTCTCAGAACAGAGAATGTGTTGAGTTTCACATTCACAACTTGCTTTGCTATTTCCCTGCGGTTATTGAAGCGATTGAAAATGCCGGGGAGATGTCAGGGTTGGATCAGGATGAGAATTCGAAGAAGAAATTGATGCTTGCAAGAAAATATGATGTGGAATGGAATGATCCAAAACTTTTTCAGTGGAGATTTGGCAAACAATATTTGGTTCCAAAAGAAATTTGCAAGCAATTGGAGAATGCTTGGAGAGAAGATAGGTGGAGGCTCATAGAAGCACTCAGAGAGAAAAAAGGTTCTTCCAAACTCACTTATTCAAAGAATGATCAACATTTTGCAGATATGTTGTTGAAGAAATTGATGAATGGTAATTCAGATAAAACTAATCACAAAAACAGTAATGATAAAGTATTGTGGCCAATTGGTGTTTTGTTAGGATCCAAAGATTACCAAGTGAGGAGAAGATTGGGAAGGGGGAAGGAATTTAAGGAAATTCAATGGTTAGGACAAAGTTTTGCTCTGAGGCATTTTCTTGGGGAGAGAGAAGCTTATGAAAATGAGATTTCCAATTTGTTATCACTTTCTCACCCAAACATATTGCAATATCTATGTGGTTTTTATGACGAAGAGAAGAAAGAGTTTTCTCTCGTGACGGAGTTGATGAACAAGGATTTGTGGACATACATGAGAGAGAATTGTGGTCCAAGGAGACAGATTTTGTTCTCTATACCTGTAGTGGTTGATCTCATGCTTCAAATGGCTAGAGGCATTGAATATCTCCACTCCAAAAACATTTACCATGGAAACCTTAATCCATGTAATATCCTACTAAGAGCTAGAAACTCACAAGAAGGTTATTTTCAAGCAAAAGTTGTTGGATTTGGGTTGTCATCTGTTGAAAATGGTGAAATTTATAATGCTTCTAGATCCTCACCGACACATAATCCAATTGGTGAAGAGATTAACCCTATAATTTGGTATGCACCTGAGGTTTTAACTGAGCTAGAACAAATGAAAAATGCTTTTACCTCTTGTAAGTACTCAGAGAAAGCCGATGCATATAGCTTTGGTATGATATGTTTTGAGTTGTTGACAGGGAAAATTCCTTTTGAGGACAATCATCTTCAAGGGATTAGAACCAACCAAAATATCAAAGCAGGAGAGAGACCTTTGTTTCCATATCGTTCGCCAAAATATCTTGTGAGTTTGATCAAAAAATGTTGGCAAACTGATCCGTCTCAGCGTCCTAGTTTCTCGTCTATTTGTAGGATTTTGCGCTACATCAAAAAGTTTCTTTCAATGAACACTGAGTATGTTTTGATCAATCCTGAACTAAATCAGCTTGAACTTCAGAACCCACCTGTAGATTGTTGTGACATTGAAGGAATTTTTCTCAAGAGTTTTCCAATGGAGAGGACATATAATATGTCATTTGTTTCACAAATACCTTATGAAATGTTTGCTTATAAAGTTGTTGAAAAAGGGAAGATTAATAATCAGAATATGAGTAATATTACTATTCCAACTATAGATAATAAGGGTAGTGAGTCTGAGCCAACAAAGGATGTGGCTACTGTTCGTAGCGAAGAAAGTGATGACCAAAGCACAGTTTTTGAAGATATTGATGCATCCATAATTAAAGATCTGGTAACCTATCCAAAATCAATTTCTGGTGACACACAGTCTATTTTTTATGATGCCCCATCAAAGAAGAAAGTTACAATAAAGAAACCATCACAAATGAAGCCAAAGAAAGACCAAGGAACGCCTAAACTGCAAGCAACAAAATCATTACCACCAACATTATCTGGTCGGGTTTCAAGGACAAATAAGGTGAACCAGTCATCATTGACATCAAGTTTTATAACCCCAGTTAAAAGAAGGCCTCCAAAAGTCTCAGAATCTGAGAGGAAATCCAATATTAACAAAGGGAATCAGTCAGCATCAGTGTCAACTTCAAGCTCAGTTAGAAAAAAAATACATGGAGGCAATGTCTCCGATTCTAAGCCTAGTTTAAATCTGAAAACAAGAGACCAATCACCATTTAACAGGTTAAAGACAAAAAAATCACAACTAACGATGAATTCTTCTTCGAGTCCAACACGAATAAGACGTGTCAATAGTACTAACAACAGCATTGTGAGGATGCAAAAAGGGTTCATTTCAACACCTCCAATGAGTCCTTCAAGGTCATACGCCAGAAGATGCTGCCATGCTTCGGATATGGATAGTTCTTTGAAGATACGAGGTAGATTGTCACCATTTCCATTGAGTCCTTTGAGTCCATATGTGAGCAATCAAAGGAATAGAAGAGGAAGCTTGTCACCATTAGCATTGAGCCCTTTGAGTCCTTATGTAAGAACAACATATGGTCATGTCTCAGATTAA 2682 0.3736 MEQLRHIGEVLGSLKALMVLSDEIQINQRQCCLLHDIFTLAFDTIADEIRQNLKLEDRTTKWKPLECPLRELSRVFKEGELYIKHCLDSKDWSGKALTLSQNRECVEFHIHNLLCYFPAVIEAIENAGEMSGLDQDENSKKKLMLARKYDVEWNDPKLFQWRFGKQYLVPKEICKQLENAWREDRWRLIEALREKKGSSKLTYSKNDQHFADMLLKKLMNGNSDKTNHKNSNDKVLWPIGVLLGSKDYQVRRRLGRGKEFKEIQWLGQSFALRHFLGEREAYENEISNLLSLSHPNILQYLCGFYDEEKKEFSLVTELMNKDLWTYMRENCGPRRQILFSIPVVVDLMLQMARGIEYLHSKNIYHGNLNPCNILLRARNSQEGYFQAKVVGFGLSSVENGEIYNASRSSPTHNPIGEEINPIIWYAPEVLTELEQMKNAFTSCKYSEKADAYSFGMICFELLTGKIPFEDNHLQGIRTNQNIKAGERPLFPYRSPKYLVSLIKKCWQTDPSQRPSFSSICRILRYIKKFLSMNTEYVLINPELNQLELQNPPVDCCDIEGIFLKSFPMERTYNMSFVSQIPYEMFAYKVVEKGKINNQNMSNITIPTIDNKGSESEPTKDVATVRSEESDDQSTVFEDIDASIIKDLVTYPKSISGDTQSIFYDAPSKKKVTIKKPSQMKPKKDQGTPKLQATKSLPPTLSGRVSRTNKVNQSSLTSSFITPVKRRPPKVSESERKSNINKGNQSASVSTSSSVRKKIHGGNVSDSKPSLNLKTRDQSPFNRLKTKKSQLTMNSSSSPTRIRRVNSTNNSIVRMQKGFISTPPMSPSRSYARRCCHASDMDSSLKIRGRLSPFPLSPLSPYVSNQRNRRGSLSPLALSPLSPYVRTTYGHVSD* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0256 893 SUPERFAMILY Protein kinase-like (PK-like) 246 549 IPR011009 -
Mtr5g0256 893 Gene3D Transferase(Phosphotransferase) domain 1 245 545 - -
Mtr5g0256 893 Pfam Protein tyrosine and serine/threonine kinase 278 522 IPR001245 GO:0004672|GO:0006468
Mtr5g0256 893 MobiDBLite consensus disorder prediction 688 721 - -
Mtr5g0256 893 MobiDBLite consensus disorder prediction 857 874 - -
Mtr5g0256 893 PANTHER SERINE-THREONINE PROTEIN KINASE 1 743 - -
Mtr5g0256 893 MobiDBLite consensus disorder prediction 613 632 - -
Mtr5g0256 893 MobiDBLite consensus disorder prediction 855 876 - -
Mtr5g0256 893 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 743 - -
Mtr5g0256 893 Pfam Protein of unknown function (DUF1221) 22 225 IPR010632 -
Mtr5g0256 893 ProSiteProfiles Protein kinase domain profile. 248 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0256 893 MobiDBLite consensus disorder prediction 670 802 - -
Mtr5g0256 893 MobiDBLite consensus disorder prediction 606 632 - -
Mtr5g0256 893 MobiDBLite consensus disorder prediction 737 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0256 Mtr-Chr5 2359664 2363200 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0256 187 540 MAP Kinase Kinase Kinase AT1G14000 30.081 7.23e-27 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Mtr5g0256 PK_Tyr_Ser-Thr 3.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0256 - - cam:101509043 1305.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0256 5 2359664 2363200 Mtr5g0256 5 2359664 2363200 ECH