Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0244 ATGTCACATGTAACATCGGATTCTGGTAGTAAAAACAATAAGAGGAAGTTGTCAAATATTATGGATGATCCTAATAATATTGTTGCCGACAATATTAATAAATCTAAAGAAATTGAGCGGCGTTACGATGATTATAGAAGGAAGAGAAAGCGTCCATGCAAAGTGGCAGTGGTTCCTACGATGGAATCAACCACCGGAGAAACCGCCACCGCGTCACATGGTTTTATATCGGTGATTGGGCGGAGGAGGGTGATGGAAGATGCTATTAAGGTGATTCCACGTTTTGTGGCGGCGGAGCAGCAACCGTGCGGTTATGATTTCTTTGCGGTTTATGACGGTCATGGTGGTATGACGGTGGCGAATGCTTGCCGTGATAGGTTGCACTTGTTGTTGGCGGAGGAAGTGAAGGAGGGTAGGAGGAATCATGGATTGGATTGGTGTGAAGCTATGTGTTCTTGTTTTATGAAGATGGATAGTGAAATTGGAGTCGGTGGAAGTTGTGGTGATGAGGTTGATGGGAATACCGTGGGTTCGACGGCGGCTGTGGTGGTGGTGGGGAAGGAGGAGATTGTAGTGGCGAATTGTGGTGACTCAAGGGCGGTGCTTTGTAGTGGCGGTGTAGCGGTGCCACTTTCACGAGATCATAAGCCAGATCTTCCGGATGAAAGAGAAAGGATTGAAGCAGCAGGTGGAAGAGTGATTGATTGGAATGGGAATCGTGTTTTAGGAGTACTCGCAACTTCCAGATCAATAGGGGATCACTGCATGAAGCCATTTGTGATATCTCAACCAGAGATCAATGTATACGGACGAACAAAATCAGATGAGTTTGTAGTGGTGGCAAGTGATGGTCTTTGGGATGTAGTATCAAATAATTTTGTTTGTGAAGTTGTTAGAAGTTGCCTTCAAGGTCATATGAGGAGGCATAATATGAAAGAAGATCACAATCACACTATTAAAAGTTATGCAGCAGAGGCTGCTGCAATCTTAGCTGAATTGGCTATGGCTAAGGGAAGCAAAGACAACATAAGTGTTATAGTCATCCAGCTCAACACTAACATGTGA 1065 0.446 MSHVTSDSGSKNNKRKLSNIMDDPNNIVADNINKSKEIERRYDDYRRKRKRPCKVAVVPTMESTTGETATASHGFISVIGRRRVMEDAIKVIPRFVAAEQQPCGYDFFAVYDGHGGMTVANACRDRLHLLLAEEVKEGRRNHGLDWCEAMCSCFMKMDSEIGVGGSCGDEVDGNTVGSTAAVVVVGKEEIVVANCGDSRAVLCSGGVAVPLSRDHKPDLPDERERIEAAGGRVIDWNGNRVLGVLATSRSIGDHCMKPFVISQPEINVYGRTKSDEFVVVASDGLWDVVSNNFVCEVVRSCLQGHMRRHNMKEDHNHTIKSYAAEAAAILAELAMAKGSKDNISVIVIQLNTNM* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0244 354 SMART PP2C_4 62 348 IPR001932 -
Mtr5g0244 354 PANTHER ALPHABET, ISOFORM E-RELATED 43 352 - -
Mtr5g0244 354 Pfam Protein phosphatase 2C 73 343 IPR001932 -
Mtr5g0244 354 MobiDBLite consensus disorder prediction 1 15 - -
Mtr5g0244 354 MobiDBLite consensus disorder prediction 1 26 - -
Mtr5g0244 354 Gene3D - 67 353 IPR036457 -
Mtr5g0244 354 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 43 352 - -
Mtr5g0244 354 CDD PP2Cc 72 350 IPR001932 -
Mtr5g0244 354 SUPERFAMILY PP2C-like 63 351 IPR036457 -
Mtr5g0244 354 ProSiteProfiles PPM-type phosphatase domain profile. 72 350 IPR001932 -
Mtr5g0244 354 ProSitePatterns PPM-type phosphatase domain signature. 107 115 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0244 Mtr-Chr5 2236676 2238470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0244 55 350 PP2C-type Phosphatase Gene Family AT1G07430 44.611 1.94e-81 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0244 K14497 - gmx:100813248 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0244 5 2236676 2238470 Mtr5g0244 5 2236676 2238470 ECH