LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr5g0229	ATGGTTGCCGTCGCTATCTCCACCGTCACTCTCACCGGTGTCAATCTTCACACCAGATTTCACTCCTCTCGCTTTTCTTCTCATTCCAAACGCTCTTCTTCTACCATCAGATGTCAAGCGGTTAATGGTGATAAGAAGAAACAAAGTAGCAGTAGTAGTAGCAGAAATGTGTTTGACAACGCCAGCAATCTCTTAACAAACTTGTTAAGCGGTGGAAGTTTAGGGAATATGCCTATAGCTGAAGGTGCTGTCACCGATTTGTTTGATCGACCTCTCTTTTTCTCACTATATGATTGGTTCTTAGAGCATGGCTCTGTGTATAAACTTGCGTTTGGGCCAAAAGCATTTGTTGTTGTATCCGATCCCATCGTTGCAAGACATATTCTACGAGAAAATGCCTTTTCTTATGACAAGGGAGTACTCGCTGATATCCTAGAACCAATTATGGGAAAAGGACTCATTCCTGCAGACCTTGAGACATGGAAGCAAAGGAGAAGAGTGATTGCTCCGGGTTTCCATACCTCATACTTGGAAGCTATGGTAAAACTATTCACTTCCTGTTCAGAAAGAACAGTATTAAAGATCGATAAGCTTCTTGAAGGAGAGGGGTATAGTGGGCAGAAGTCAATCGAATTGGACCTTGAGGCAGAATTTTCAAATTTGGCGCTTGATATTATTGGGCTAGGTGTGTTCAACTATGACTTTGGTTCTGTCACCAATGAATCTCCCGTTATTAAGGCAGTGTATGGCACACTTTTTGAAGCTGAACATAGATCCACTTTCTATATTCCATATTGGAAATTTCCATTAGCAAGGTGGATAGTACCCAGGCAAAGGAAGTTTCAGGATGACCTTAAGGTCATTAATACTTGTCTCGATGGACTTATAAGAAATGCAAAAGAGAGTAGGGAGGAAACAGACGTTGAGAAACTGCAGCAAAGGGATTACTCAAATTTGAAGGATGCAAGTCTTCTGCGCTTTCTAGTTGATATGCGGGGAGTTGATGTTGATGATCGTCAGTTGAGGGATGATTTAATGACAATGCTTATTGCTGGTCATGAGACGACGGCTGCAGTTCTTACATGGGCAGTTTTCCTGCTAGCTCAAAATCCTGACAAAATGAAGAAGGCTCAAGCAGAGGTAGATTCGGTGTTGGGTACGGGGAAGCCAACTTTTGAATTGCTTAAAAAGTTGCAGTACATCAGGTTGATTGTTGTGGAGGCTCTACGATTATATCCACAACCACCTCTGCTGATTAGACGTTCACTCAAATCTGATGTTTTACCAGGAGGGCATAAAGGTGACAAAGATGGTTATACAATTCCTGCTGGGACTGATGTCTTCATTTCTGTATATAATCTCCATCGATCTCCATATTTTTGGGACCGCCCTGATGACTTTGAGCCTGAACGATTCCTAGTTGAAAACAAGAATGAAGAAATTGAAGGGTGGGCTGGTTTTGATCCATCTCGAAGTCCTGGGGCATTGTATCCAAACGAGATTATATCGGATTTTGCATTCTTGCCTTTTGGCGGTGGACCACGAAAATGTGTTGGAGATCAATTTGCTCTCATGGAGTCCACAGTAGCTCTGACTATGCTGCTTCAAAATTTTGACGTGGAATTGAAGGGGACCCCTGAATCTGTTGAACTAGTTACCGGGGCAACTATCCATACCAAAAATGGATTGTGGTGCAATTTGAGGAAGAGATCTTTTGCACATTGA	1725	0.4238	MVAVAISTVTLTGVNLHTRFHSSRFSSHSKRSSSTIRCQAVNGDKKKQSSSSSSRNVFDNASNLLTNLLSGGSLGNMPIAEGAVTDLFDRPLFFSLYDWFLEHGSVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLETWKQRRRVIAPGFHTSYLEAMVKLFTSCSERTVLKIDKLLEGEGYSGQKSIELDLEAEFSNLALDIIGLGVFNYDFGSVTNESPVIKAVYGTLFEAEHRSTFYIPYWKFPLARWIVPRQRKFQDDLKVINTCLDGLIRNAKESREETDVEKLQQRDYSNLKDASLLRFLVDMRGVDVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPDKMKKAQAEVDSVLGTGKPTFELLKKLQYIRLIVVEALRLYPQPPLLIRRSLKSDVLPGGHKGDKDGYTIPAGTDVFISVYNLHRSPYFWDRPDDFEPERFLVENKNEEIEGWAGFDPSRSPGALYPNEIISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQNFDVELKGTPESVELVTGATIHTKNGLWCNLRKRSFAH*	575

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr5g0229	574	Pfam	Cytochrome P450	99	564	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr5g0229	574	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	510	519	IPR017972	GO:0005506\|GO:0016705
	Mtr5g0229	574	Gene3D	Cytochrome P450	76	574	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr5g0229	574	SUPERFAMILY	Cytochrome P450	87	570	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr5g0229	574	MobiDBLite	consensus disorder prediction	26	56	-	-
	Mtr5g0229	574	PRINTS	E-class P450 group I signature	100	119	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr5g0229	574	PRINTS	E-class P450 group I signature	340	357	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr5g0229	574	PRINTS	E-class P450 group I signature	360	386	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr5g0229	574	PRINTS	E-class P450 group I signature	507	517	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr5g0229	574	PRINTS	E-class P450 group I signature	517	540	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr5g0229	Mtr-Chr5	2109485	2117840	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr5g0229	26	571	Cytochrome P450	AT4G15110	77.514	0.0	909

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr5g0229	K24543		-	gmx:606504	971.844

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