Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0203 ATGGGATTCTGGGGAATTGAAGTGAAACCTGGCAATCCGGTTCCGTATAGCACTCACGATGTTGAAGGAAAGCTTCACGTCACTCAGGCTACTCTAGGCGTTGGCGTTGGTCCATCGACGGAGAAAAGCATTCTTCAGTGCTCTTCTGGACGCAAAAATCCAGTTTTTTTGTGTTCCTTGCTGCCAAACAAGGTTGAGACTTGCCCTTTGAATCTTAAGTTCGACGAGGATGACTTGGTGAAATTCTCAGTCATCGGTTCCCGAAGCATCCATCTTTCTGGTTATTTTGTGCCAGATGAAGACGACACTAGAGATGACTATGAATATGATTCATTAGGAGAGGACGTGGGAACTGGGTCAGAGGAGTCATCTGAATATGATAGTGAAAATGGATATGATGATCACTTTTTTGATGACAGTGATATGGAAATGTACACATCTTCGCCTGTCCGGAGTAGTGGAGTCGTTATTGAGGAAATACCCGATGACAATCAGCCTGAAAATGGAGATAATCCAGCAAAGCAATCGAAGAAAAAGGAACAAACAGCTCACTTGAGAGAGAAATCCAGCAAAAGTTCTCAGCTTCCAGTTGTCATTAGAGGTGACGATAAGCTTGTCTTGGAAAGTGAAGATGAAGATGGTTTCCCGATTTCCACTTCAGACAAAGCTAAATCTGAGTCTCAGAAGGCAGAAACAGAAACAAAAGGAGAACAAGCCCACAAAAAAACTGGGAAATCAAATAAGAAGGCAAAAGATGTTGATGAGTCTGCTAGCTTAAAACGAAAAGTTCAAGCTGTTGATGAGGATGAGCAGCTGCAAGATGGGAAAAAGAAGAAGAAGAAGAACAAGTTGAAAGATCATGGTAAGGAGGAAAGTGGTCATGTAAAGGAGACTAGTGTAACTGTGCCAGATGAAAAGCCTGAGGAGGTTAAAACTACAACCAACCAGAACAATGTCTCTCATGCAAAGGATGGAGATGATGGGAAACTATCCAATGACGAAGTCCTCGTTGAGAAGAAAAACAAGAAGAAAAACAAGAAAAAGACCAAAGAGGCTGAAGGAAAAGCTGCTAAGAATGAAATTGCTACAACTGTTGAAAGTCAGAAGTTGTCTACCTCTGAGAAAAAAGAGAAAGAACCAACTGAAGCCAAGCCATCTAACGTGAGAACCTATCCAAATGGATTGGTTATAGAGGACATATCTATGGGCAAACCAGATGGCAAAAGAGCTGATCTTGGAAAGAAGGTCAGTGTTAAATATACTGGAAAGCTACAAAAAGATGGGAAAATATTTGACTCGTGTGCTGGAAAAGCACCCTTTAAGTTTCGGCTTGGTGTAGGACAAGTCATCAAGGGGTGGGATGTTGGCGTCAATGGGATGAGGGTTGGGGACAAAAGAAGACTTACAATTCCACCATCTATGGGATACGGTGACAAACGTGTTGGGAGTATACCACAAAATTCATGGCTTGTATTTGATGTTGAGTTGGTTGGCGTTGAAGGCCGCTGA 1509 0.4235 MGFWGIEVKPGNPVPYSTHDVEGKLHVTQATLGVGVGPSTEKSILQCSSGRKNPVFLCSLLPNKVETCPLNLKFDEDDLVKFSVIGSRSIHLSGYFVPDEDDTRDDYEYDSLGEDVGTGSEESSEYDSENGYDDHFFDDSDMEMYTSSPVRSSGVVIEEIPDDNQPENGDNPAKQSKKKEQTAHLREKSSKSSQLPVVIRGDDKLVLESEDEDGFPISTSDKAKSESQKAETETKGEQAHKKTGKSNKKAKDVDESASLKRKVQAVDEDEQLQDGKKKKKKNKLKDHGKEESGHVKETSVTVPDEKPEEVKTTTNQNNVSHAKDGDDGKLSNDEVLVEKKNKKKNKKKTKEAEGKAAKNEIATTVESQKLSTSEKKEKEPTEAKPSNVRTYPNGLVIEDISMGKPDGKRADLGKKVSVKYTGKLQKDGKIFDSCAGKAPFKFRLGVGQVIKGWDVGVNGMRVGDKRRLTIPPSMGYGDKRVGSIPQNSWLVFDVELVGVEGR* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0203 502 MobiDBLite consensus disorder prediction 203 277 - -
Mtr5g0203 502 Pfam Nucleoplasmin-like domain 3 97 IPR041232 -
Mtr5g0203 502 MobiDBLite consensus disorder prediction 285 311 - -
Mtr5g0203 502 MobiDBLite consensus disorder prediction 95 389 - -
Mtr5g0203 502 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 413 500 IPR001179 GO:0003755
Mtr5g0203 502 MobiDBLite consensus disorder prediction 370 384 - -
Mtr5g0203 502 Gene3D - 356 501 IPR046357 GO:0003755
Mtr5g0203 502 MobiDBLite consensus disorder prediction 322 340 - -
Mtr5g0203 502 MobiDBLite consensus disorder prediction 172 187 - -
Mtr5g0203 502 Gene3D Nucleoplasmin core domain 1 103 - -
Mtr5g0203 502 PIRSF FK506-bp_FPR3 1 53 IPR023566 GO:0003755
Mtr5g0203 502 PIRSF FK506-bp_FPR3 51 283 IPR023566 GO:0003755
Mtr5g0203 502 PIRSF FK506-bp_FPR3 196 336 IPR023566 GO:0003755
Mtr5g0203 502 PIRSF FK506-bp_FPR3 296 500 IPR023566 GO:0003755
Mtr5g0203 502 SUPERFAMILY FKBP-like 356 500 - -
Mtr5g0203 502 PANTHER PEPTIDYLPROLYL ISOMERASE 1 254 - -
Mtr5g0203 502 PANTHER PEPTIDYLPROLYL ISOMERASE 272 499 - -
Mtr5g0203 502 Coils Coil 340 360 - -
Mtr5g0203 502 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 408 497 IPR001179 GO:0003755
Mtr5g0203 502 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 272 499 - -
Mtr5g0203 502 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 1 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0203 Mtr-Chr5 1881674 1886391 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0203 413 497 Calmodulin-binding Proteins AT3G25230 51.685 1.11e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0203 K14826 - gmx:100792856 648.662