Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0168 ATGATGGGGACAAGAAATTTAGTTTGGAATGTTACTAAAAAATTGGCCACAATTGGTCTCATTACTTTCACTGTCTCTGATCGTTATGCAACTGTTGTTCCTGTTCGTGGTGCTTCTATGTCTCCCACTTTCAATCCCAAAACTAATTCCTTCACAGATGATTATGTCTTTGTTGAGAAACTTTGCCTTGATAAGTTCAAGTTTTCGCACGGTGATATCGTCATCTTCAGTTCCCCGTCGAATTTTAAGGAGACACACATAAAGAGAATAATTGCATTACCTGGTGAGTGGTTTGTTAATCGTCATAACCAGGACGTACTGAAGGTTCCAGAAGGGCATTGTTGGGTTGAGGGAGACAATGCAGCTTCTAGCACAGATTCAAAATCATATGGACCTGTTCCATTGGGTCTAGTACGAGGAAGGGTTACTCATGTTGTTTGGCCTCCTCAAAGAATAGGAGCTGTCAAGAATACTACACCAGAAAGATTACCTTCTTCATAG 501 0.4072 MMGTRNLVWNVTKKLATIGLITFTVSDRYATVVPVRGASMSPTFNPKTNSFTDDYVFVEKLCLDKFKFSHGDIVIFSSPSNFKETHIKRIIALPGEWFVNRHNQDVLKVPEGHCWVEGDNAASSTDSKSYGPVPLGLVRGRVTHVVWPPQRIGAVKNTTPERLPSS* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0168 166 SUPERFAMILY LexA/Signal peptidase 31 155 IPR036286 -
Mtr5g0168 166 PANTHER INNER MEMBRANE PROTEASE SUBUNIT-RELATED 2 157 - -
Mtr5g0168 166 TIGRFAM sigpep_I_bact: signal peptidase I 21 98 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mtr5g0168 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 28 44 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mtr5g0168 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 86 98 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mtr5g0168 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 109 128 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mtr5g0168 166 Pfam Signal peptidase, peptidase S26 104 147 IPR019533 GO:0004252|GO:0006465
Mtr5g0168 166 Pfam Signal peptidase, peptidase S26 11 96 IPR019533 GO:0004252|GO:0006465
Mtr5g0168 166 Gene3D Umud Fragment, subunit A 28 161 - -
Mtr5g0168 166 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 2 157 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Mtr5g0168 166 CDD S26_SPase_I 32 142 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0168 Mtr-Chr5 1564107 1567167 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0168 40 158 MADS-box Gene Family AT1G29960 36.800 1.05e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0168 K09648 - qsu:112006356 251.136