Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0157 ATGTTGTCAGTAGCTCCTTCTGTTGATGCTAAACAGACCACAGAAGTATCCACTTCTGTTTCTGTACCTAAACTTGAACAAATTAACAACCAAAAACAAAAACCTTGTGATAGTTTTGAGGATGATTCTATTTCTATTTCTCTTTCTAACCAAACTACTCATATATTCAAATCAAAATTACCAGATATACCTATTTCTAACCACCTCCCACTTCATACCTACTGCTTCGAAAACCTCTCCGAATTTGCTGATCGGCCTTGTCTAATCGTCGCTGCCACCGGAAAAACATATACCTATGCCGAAACCTATCTCCAATGCCAAAAAATCGCGGCTGGTTTGTCCAAATTAGGCATCCAGAAAGGCGATGTAATCATGATTCTTCTACAAAACTCAGCTGAATTTGTTCTCTCTTTCATCGCTGCTTCCATGATTGGTGCGGTCGCAACCACCGCCAATCCTTTCTACACCAGCGCTGAAATCTTCAAACAAATAAAAGCTTCTGAAACAAAACTCATTATTACACAAGCAATGTACGTTGATAAACTCCGTCAAAAGGATCAGGTTGGTGCAGAATTTGACTTTAAGGTGATAACAACCGACGAACCACCGCTGAATTGTTTACATTTTTCGGTGATTTCTGAGTCGAACGAAGAGGATATTCCGGTAGTGGAGATCGATCCAGAAGACGCGGTGGCGCTACCATTTTCTTCAGGAACAACAGGATTACCTAAAGGAGTGATTCTAACACACAAGAGTTTAACAACAAGTGTGGCACAACAAGTGGATGGAGAGAATCCAAATCTACATTTAACAACAGAAGATGTTCTTCTTTGTGTTCTTCCATTGTTTCATATATTTTCTCTCAACAGTGTGTTATTGTGTGCACTGAGAGCAGGAAGTGGGGTTTTGTTGATGCATAAATTTGAGATTGGGACTTTGCTTGGTCTTATACAAAAACATAAGGTTACGGTGGCGATGGTTGTTCCGCCGTTGGTTTTGGCGTTGGCGAAGAGTCCGTCGGTGGCGGAGTTTGATCTGAGTTCAATAAGGTTGGTGTTGTCTGGTGCTGCACCGTTAGGGAAGGAGCTTGAAGAAACTCTTCATAATAGAATTCCTCAAGCTGTTTTGGGACAGGGGTACGGTATGACAGAGGCAGGCCCGGTACTGTCCATGTCTTTGGGCTTTGCAAAGAACCCATTCCCAACAAGTTCAGGCTCATGTGGCACTGTTGTAAGAAATGCAGAGCTCAAAGTTCTTGACCCTGAAACTGGTCGTTCTCTTGGTTATAATCAACCTGGTGAAATTTGCATACGTGGCCAACAAATCATGAAAGGATATTTGAATGATGAAAATGCAACAAAAACTACTATTGATGAGGAGGGTTGGCTTCATACTGGTGATGTTGGCTATATAGATGACAATGATGAGATTTTCATAGTTGACAGAGTTAAAGAACTCATCAAATTCAAAGGCTTCCAAGTGCCCCCTGCTGAACTTGAAGGTCTTCTTGTAAGTCATCCATCTATTGCAGATGCAGCTGTTGTCCCGCAAAAGGATGTTGCTGCTGGTGAAGTTCCTGTTGCCTTTGTGGTAAGATCAAATGGAAATGATCTAACTGAAGAGATTGTAAAGGAGTTTATAGCTAAACAGGTGGTATTTTATAAAAGACTGCACAAAGTATATTTTGTTCATGCAATTCCAAAGTCTCCTGCAGGAAAGATATTGAGGAAGGACCTGAAAGCAAAGCTAGAAAGCTCCACCTAA 1764 0.4127 MLSVAPSVDAKQTTEVSTSVSVPKLEQINNQKQKPCDSFEDDSISISLSNQTTHIFKSKLPDIPISNHLPLHTYCFENLSEFADRPCLIVAATGKTYTYAETYLQCQKIAAGLSKLGIQKGDVIMILLQNSAEFVLSFIAASMIGAVATTANPFYTSAEIFKQIKASETKLIITQAMYVDKLRQKDQVGAEFDFKVITTDEPPLNCLHFSVISESNEEDIPVVEIDPEDAVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLHLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSGVLLMHKFEIGTLLGLIQKHKVTVAMVVPPLVLALAKSPSVAEFDLSSIRLVLSGAAPLGKELEETLHNRIPQAVLGQGYGMTEAGPVLSMSLGFAKNPFPTSSGSCGTVVRNAELKVLDPETGRSLGYNQPGEICIRGQQIMKGYLNDENATKTTIDEEGWLHTGDVGYIDDNDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGNDLTEEIVKEFIAKQVVFYKRLHKVYFVHAIPKSPAGKILRKDLKAKLESST* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0157 587 PANTHER 4-COUMARATE--COA LIGASE 3 54 582 - -
Mtr5g0157 587 CDD 4CL 65 579 - -
Mtr5g0157 587 Gene3D - 47 483 IPR042099 -
Mtr5g0157 587 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 54 582 - -
Mtr5g0157 587 SUPERFAMILY Acetyl-CoA synthetase-like 59 584 - -
Mtr5g0157 587 Gene3D - 484 586 IPR045851 -
Mtr5g0157 587 Pfam AMP-binding enzyme 78 489 IPR000873 -
Mtr5g0157 587 Pfam AMP-binding enzyme C-terminal domain 498 573 IPR025110 -
Mtr5g0157 587 ProSitePatterns Putative AMP-binding domain signature. 233 244 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0157 Mtr-Chr5 1457921 1464059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0157 31 496 Monolignol Biosynthesis Gene Families AT1G65060 69.296 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0157 K01904 - gmx:547492 902.894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0157 5 1457921 1464059 Mtr5g0157 5 1457921 1464059 ECH