Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0137 ATGGGGGATGGAGAAGGTGTAGTTGGAGTGAGAAGTCTGAATGAAGAAGAAATCAAGTGGCCACCATGGTTGCAACCACTTCTCCAAGCAAGGTTCTTTGTTCAATGCAAAGTGCATGCAGATTCCAACAAAAGTGAATGCAATATGTATTGCTTGGACTGTATGAATGGAGCACTCTGTTCTTCTTGTCTAGCTTCTCACAAAGATCATAGAGCTATCCAGATAAGAAGGTCTTCATATCATGATGTGATAAGGGTATCTGAGATACAGAAATTTTTGGACATAACAGGGGTTCAAACATACGTTATAAACAGTGCAAAAATTGTGTTCTTGAATGAAAGGCCTCAGCCTAAGCCTGGCAAAGGTGTCACCAATATTTGCCATGTCTGTGAACGAAGCCTTCTTGATTCATTCACCTACTGCTCCCTTGGTTGTAAGATAGTTGGAACCTCCAAGAAATTTCAGAAGAAGTTAAGTGAGAGACATCGATCAGAAGGTGAAGAATCATATAGTAATGAAAATGACATAAACATAAACAAAACTCAGAGCTTCACACCTTCAACACCGCCACCTTACAAAATTGCTAAGAGGAGGAAGGGAGTCCCACATAGAGCTCCAATAGGGGGAGGCCTTATTTACTGA 642 0.4097 MGDGEGVVGVRSLNEEEIKWPPWLQPLLQARFFVQCKVHADSNKSECNMYCLDCMNGALCSSCLASHKDHRAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKIVFLNERPQPKPGKGVTNICHVCERSLLDSFTYCSLGCKIVGTSKKFQKKLSERHRSEGEESYSNENDININKTQSFTPSTPPPYKIAKRRKGVPHRAPIGGGLIY* 214
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0137 213 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 12 209 - -
Mtr5g0137 213 MobiDBLite consensus disorder prediction 159 191 - -
Mtr5g0137 213 Pfam PLATZ transcription factor 76 147 IPR006734 -
Mtr5g0137 213 MobiDBLite consensus disorder prediction 171 189 - -
Mtr5g0137 213 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 12 209 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr5g0137 Mtr-Chr5 1265266 1267490 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mtr5g0137 PLATZ 9.9e-29 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0137 - - gmx:100796834 345.895
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2447 4 38067390 38069840 Mtr5g0137 5 1265266 1267490 ECH
Mtr5g0137 5 1265266 1267490 Mtr5g0137 5 1265266 1267490 ECH