LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr5g0137	ATGGGGGATGGAGAAGGTGTAGTTGGAGTGAGAAGTCTGAATGAAGAAGAAATCAAGTGGCCACCATGGTTGCAACCACTTCTCCAAGCAAGGTTCTTTGTTCAATGCAAAGTGCATGCAGATTCCAACAAAAGTGAATGCAATATGTATTGCTTGGACTGTATGAATGGAGCACTCTGTTCTTCTTGTCTAGCTTCTCACAAAGATCATAGAGCTATCCAGATAAGAAGGTCTTCATATCATGATGTGATAAGGGTATCTGAGATACAGAAATTTTTGGACATAACAGGGGTTCAAACATACGTTATAAACAGTGCAAAAATTGTGTTCTTGAATGAAAGGCCTCAGCCTAAGCCTGGCAAAGGTGTCACCAATATTTGCCATGTCTGTGAACGAAGCCTTCTTGATTCATTCACCTACTGCTCCCTTGGTTGTAAGATAGTTGGAACCTCCAAGAAATTTCAGAAGAAGTTAAGTGAGAGACATCGATCAGAAGGTGAAGAATCATATAGTAATGAAAATGACATAAACATAAACAAAACTCAGAGCTTCACACCTTCAACACCGCCACCTTACAAAATTGCTAAGAGGAGGAAGGGAGTCCCACATAGAGCTCCAATAGGGGGAGGCCTTATTTACTGA	642	0.4097	MGDGEGVVGVRSLNEEEIKWPPWLQPLLQARFFVQCKVHADSNKSECNMYCLDCMNGALCSSCLASHKDHRAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKIVFLNERPQPKPGKGVTNICHVCERSLLDSFTYCSLGCKIVGTSKKFQKKLSERHRSEGEESYSNENDININKTQSFTPSTPPPYKIAKRRKGVPHRAPIGGGLIY*	214

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr5g0137	213	PANTHER	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	12	209	-	-
	Mtr5g0137	213	MobiDBLite	consensus disorder prediction	159	191	-	-
	Mtr5g0137	213	Pfam	PLATZ transcription factor	76	147	IPR006734	-
	Mtr5g0137	213	MobiDBLite	consensus disorder prediction	171	189	-	-
	Mtr5g0137	213	PANTHER	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	12	209	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr5g0137	Mtr-Chr5	1265266	1267490	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	PLATZ	Mtr5g0137		PLATZ	9.9e-29	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr5g0137	-		-	gmx:100796834	345.895

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr4g2447	4	38067390	38069840	Mtr5g0137	5	1265266	1267490	ECH
	Mtr5g0137	5	1265266	1267490	Mtr5g0137	5	1265266	1267490	ECH