Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0106 ATGGATTTTGAAGGTGAAGGTGTTAGGACACCAAAGGTGGAGTTGGAAGAAGGAGCAAAAAGTGTGATGAATTCAAAGATGAAGGGTGCTGGAAACCAAAGCAGTAAAGATATGATTTTCAGAGCTGATAGAATTGATCTCAAGAATTTGGATGCTCAATTGGAAAAGCACTTAAGCCGGGTTTGGTCAAGAAACACCAATGAGACAAAAAGGCCTAGAGAAGAATGGGAGGTTGAGTTGGCCAAATTGGATTTAAGGTATGTTGTTGCTCATGGTGCTTATGGTACTGTCTATAGAGGCACATATGATACTCAAGATGTTGCAGTGAAAGTGTTGGATTGGGGTGAGGATGGTGCTGCCACCGCTGCAGAAACTGCTGCTTTACGTGCATCTTTTAGGCAGGAGGTTGCCGTCTGGCACAAACTCGACCATCCAAATGTCACTAAATTTGTCGGAGCTTCAATGGGAACTTCAAATCTTAAGATTCCTACAAAAAACTCTTCAACCAACAATCAAGAGAACCTTCCTTCTAGGGCATGTTGCGTCATTGTCGAGTTTCTTCCTGGTGGAACACTAAAGCAATACTTGATAAGAAATAGGCGGAAGAAACTTGCGTATAGGATTGTGGTTCAGCTCGCTTTGGACCTCTCCAGAGGTCTTAGCTATCTACATTCAGAGAAGATTGTTCACCGTGATGTTAAGACGGAGAATATGTTGCTAGATGGTAACCGGAATCTAAAGATAGCTGATTTTGGAGTTGCTCGGGTTGAAGCTTTGAATCCAAGTGACATGACTGGTGAAACTGGAACCCTTGGATATATGGCTCCTGAGGTTTTGGATGGTAAACCTTACAACAGGACATGTGATGTATACAGCTTTGGCATTTGCTTGTGGGAAATTTATTGCTGTGATATGCCTTATCCAGATCTAAGCTTTGCTGATGTGTCTTCCGCTGTCGTTCGTCAGAATTTACGACCAGAAATTCCAAGGTGTTGTCCGAGTGCATTGGCGAACATCATGCGGAAATGCTGGGATGCGAATCCGATCAAACGTCCGGAAATGAAGGATGTGGTGATAATGCTAGAAGCACTGGATACAAGCAAAGGTGGTGGAATGATTCCTGAAGATCAAAGTTCAGGTTGCTTTTGTTTTGCACCTCAAAGAGGTCCTTAA 1173 0.4314 MDFEGEGVRTPKVELEEGAKSVMNSKMKGAGNQSSKDMIFRADRIDLKNLDAQLEKHLSRVWSRNTNETKRPREEWEVELAKLDLRYVVAHGAYGTVYRGTYDTQDVAVKVLDWGEDGAATAAETAALRASFRQEVAVWHKLDHPNVTKFVGASMGTSNLKIPTKNSSTNNQENLPSRACCVIVEFLPGGTLKQYLIRNRRKKLAYRIVVQLALDLSRGLSYLHSEKIVHRDVKTENMLLDGNRNLKIADFGVARVEALNPSDMTGETGTLGYMAPEVLDGKPYNRTCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSALANIMRKCWDANPIKRPEMKDVVIMLEALDTSKGGGMIPEDQSSGCFCFAPQRGP* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0106 390 SUPERFAMILY Protein kinase-like (PK-like) 60 361 IPR011009 -
Mtr5g0106 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Mtr5g0106 390 SMART serkin_6 83 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0106 390 CDD STKc_MAP3K-like 89 361 - -
Mtr5g0106 390 ProSiteProfiles Protein kinase domain profile. 83 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0106 390 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 16 384 - -
Mtr5g0106 390 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 16 384 - -
Mtr5g0106 390 PRINTS Tyrosine kinase catalytic domain signature 184 197 IPR001245 GO:0004672|GO:0006468
Mtr5g0106 390 PRINTS Tyrosine kinase catalytic domain signature 222 240 IPR001245 GO:0004672|GO:0006468
Mtr5g0106 390 PRINTS Tyrosine kinase catalytic domain signature 288 310 IPR001245 GO:0004672|GO:0006468
Mtr5g0106 390 PRINTS Tyrosine kinase catalytic domain signature 332 354 IPR001245 GO:0004672|GO:0006468
Mtr5g0106 390 Gene3D Phosphorylase Kinase; domain 1 72 166 - -
Mtr5g0106 390 Pfam Protein tyrosine and serine/threonine kinase 86 359 IPR001245 GO:0004672|GO:0006468
Mtr5g0106 390 Gene3D Transferase(Phosphotransferase) domain 1 189 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0106 Mtr-Chr5 995668 1000533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0106 24 390 MAP Kinase Kinase Kinase AT3G22750 80.163 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mtr5g0106 PK_Tyr_Ser-Thr 1.7e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0106 - - mtr:MTR_5g006560 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3876 1 50395330 50399177 Mtr5g0106 5 995668 1000533 PCT