Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0101 ATGGAGCAAAATATTATGATAGAGCGACTTTCTATTTCTTCCAAAGAAGAGATCATTGATTTGAACCAAATCACACTCCGATCTTTTAATCTTTCTGACCTCGATGATCTCATGGTGTGGCACACTGATGAAAAAGTGGCCAAGTTCTGGGGGGAACCTTACACCAGCAAAGACCAAGGCATCAACTTCATCAAAAATATGGCAGGCAAGTATCTACGTTGCAAAGCAATATGCCATAACGATCATGCTATTGGGTGTATTAAGTTGTCCTCCAGTTCACTTTATGACAAGAGTAGGAACAGATGTGCAGAAATTGGGTATGTTCTAGCCTCTAAATATTGGGGTAAAGGGATTGCCACATGTGCTGTGAAACAAATGGTTAAGGTTGCATTCAGTGAATTTCAATCCTTGGAAAGGCTTCAAGCTCTTGTTGATATGGATAATGTTGGGTCGCAAAAAGTACTTGAGAAAGTTGGTTTTCAAAAAGAGGGGCTTCTTAGGAAGTATGTATTCTTTAAAGGAAAAAGCAGAGATATGATCATGTTCAGTCTTCTTTTTACTGATCTTCAACTATGA 576 0.3872 MEQNIMIERLSISSKEEIIDLNQITLRSFNLSDLDDLMVWHTDEKVAKFWGEPYTSKDQGINFIKNMAGKYLRCKAICHNDHAIGCIKLSSSSLYDKSRNRCAEIGYVLASKYWGKGIATCAVKQMVKVAFSEFQSLERLQALVDMDNVGSQKVLEKVGFQKEGLLRKYVFFKGKSRDMIMFSLLFTDLQL* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0101 191 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 15 189 - -
Mtr5g0101 191 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 15 189 - -
Mtr5g0101 191 Pfam Acetyltransferase (GNAT) domain 24 161 IPR000182 GO:0016407
Mtr5g0101 191 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 22 185 IPR016181 -
Mtr5g0101 191 Gene3D - 21 187 - -
Mtr5g0101 191 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 24 178 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0101 Mtr-Chr5 948881 952731 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Mtr5g0101 Acetyltransf_3 1.8e-25 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0101 - - mtr:MTR_5g006520 249.98