Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0082 ATGGCAGAACGAGAACCTGCATATACTGTTGCATCTGACAGTGAAACAACTGGGGAGGAAAAATCATCGCCTCTTCCTGAAATAGCGATTGGAATTGATATTGGCACCTCACAATGTAGCGTTGCTGTGTGGAATGGCTCCGAAGTGGAGCTTTTGAAAAACAAAAGAAATCAGAAGCTTATGAAGTCATTTGTGACATTCAAAGATGAAGCTCCTTCTGGAGGAGTTACTAGTCAATTCTCCCATGAGCATGAGATGCTGTTTGGAGATACGATTTTCAACATGAAACGCTTGATCGGCAGAGTTGATACTGACCCTGTGGTTCATGCAAGTAAAAATCTGCCATTTCTGGTGCAGACCTTGGACATTGGCGTTCGTCCCTTTATTGCTGCGTTAGTGAACAATGTTTGGAGATCCACCACTCCCGAAGAAGTCCTTGCAATGTTTCTGGTGGAGTTAAGACTGATGACTGAAACTCATCTCAAACGACCGATAAGAAATGTGGTGCTTACTGTGCCGGTTTCATTCAGTCGCTTCCAGCTGACCCGCTTAGAGCGTGCTTGCGCGATGGCTGGTCTTCATGTTCTCAGGTTGATGCCTGAACCAACAGCAGTGGCGTTATTATATGGACAGCAACAACAGAAAGCTTCTCAAGAAACTATGGGCAGTGGAAGTGAGAAAATTGCTCTCATTTTCAATATGGGTGCTGGTTATTGTGATGTTGCTGTGACTGCTACCGCTGGGGGAGTATCTCAGATAAAAGCCTTGGCAGGAAGTACCATCGGTGGAGAAGATTTGCTTCAGAATATGATGCGCCATCTCTTACCAGATTCTGAAAATATATTCAAGCGTCACGGGGTTGAAGAAATTAAGTCAATGGCATTGCTTCGAGTTGCAACCCAGGATGCAATTCATCAGCTTTCCACCCAAAGCAGTGTTCAGGTTGATGTAGATTTGGGAAATAGTTTGAAGATATGCAAGGTTGTTGACAGGGCGGAGTTTGAGGAGGTGAACAAAGAGGTGTTCGAAAAGTGTGAAAGCCTTATCATCCAATGTTTACATGATGCAAAGGTAGAAGTCGGGGATATAAATGATGTGATACTTGTTGGTGGATGTTCATATATCCCAAGGGTGGAGAATCTTGTTACCAACTTATGCAAAATTACAGAAGTTTATAAAGGTATAAACCCTTTGGAAGGTGCGGTTTGTGGTGCAGCAATGGAAGGAGCTGTTGCTTCAGGCATCAGTGATCCTTTTGGAAACTTGGACTTGTTAACGATTCAAGCCACTCCTCTTGCCATTGGAATCCGAGCTGATGGGAACAAGTTTGTACCTGTAATTCCGAGGAACACCACAATGCCAGCGCGTAAGGATCTACTTTTCACAACTATTCATGATAATCAAACTGAGGCATTGATACTTGTGTACGAAGGTGAGGGAAAGAAGGCAGAAGAAAACCACTTGTTAGGATATTTCAAGATAATGGGAATACCTGCAGCACCAAAAGGAGTTCCTGAAATCAGTGTGTGCATGGACATAGATGCTGCAAACGTGCTGCGAGTTTTAACCGGTGTTGTGATGCCTGGATCCCGTATAACTGTGGTTCCTGTTATGGAAGTGAGGATGCCAATGGTTGATGATGGTCATGGTTGGTGTGCTGAGGCCCTAAATAGGACCCATGGTGCCACAATGGATTTGGTTACCCTCAAGAAGGCATAA 1719 0.4421 MAEREPAYTVASDSETTGEEKSSPLPEIAIGIDIGTSQCSVAVWNGSEVELLKNKRNQKLMKSFVTFKDEAPSGGVTSQFSHEHEMLFGDTIFNMKRLIGRVDTDPVVHASKNLPFLVQTLDIGVRPFIAALVNNVWRSTTPEEVLAMFLVELRLMTETHLKRPIRNVVLTVPVSFSRFQLTRLERACAMAGLHVLRLMPEPTAVALLYGQQQQKASQETMGSGSEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLLQNMMRHLLPDSENIFKRHGVEEIKSMALLRVATQDAIHQLSTQSSVQVDVDLGNSLKICKVVDRAEFEEVNKEVFEKCESLIIQCLHDAKVEVGDINDVILVGGCSYIPRVENLVTNLCKITEVYKGINPLEGAVCGAAMEGAVASGISDPFGNLDLLTIQATPLAIGIRADGNKFVPVIPRNTTMPARKDLLFTTIHDNQTEALILVYEGEGKKAEENHLLGYFKIMGIPAAPKGVPEISVCMDIDAANVLRVLTGVVMPGSRITVVPVMEVRMPMVDDGHGWCAEALNRTHGATMDLVTLKKA* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0082 572 SUPERFAMILY Actin-like ATPase domain 225 411 IPR043129 -
Mtr5g0082 572 Pfam Hsp70 protein 29 521 IPR013126 GO:0005524|GO:0140662
Mtr5g0082 572 SUPERFAMILY Actin-like ATPase domain 28 212 IPR043129 -
Mtr5g0082 572 Gene3D Actin; Chain A, domain 4 263 344 - -
Mtr5g0082 572 CDD HSP70_NBD 30 410 - -
Mtr5g0082 572 Gene3D - 30 410 - -
Mtr5g0082 572 MobiDBLite consensus disorder prediction 1 23 - -
Mtr5g0082 572 PRINTS 70kDa heat shock protein signature 28 41 - -
Mtr5g0082 572 PRINTS 70kDa heat shock protein signature 168 188 - -
Mtr5g0082 572 PRINTS 70kDa heat shock protein signature 363 379 - -
Mtr5g0082 572 PRINTS 70kDa heat shock protein signature 395 415 - -
Mtr5g0082 572 PRINTS 70kDa heat shock protein signature 423 442 - -
Mtr5g0082 572 PRINTS 70kDa heat shock protein signature 504 520 - -
Mtr5g0082 572 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 420 535 IPR029047 -
Mtr5g0082 572 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 6 571 - -
Mtr5g0082 572 Gene3D - 214 392 - -
Mtr5g0082 572 PANTHER HEAT SHOCK PROTEIN 70KDA 6 571 IPR013126 GO:0005524|GO:0140662
Mtr5g0082 572 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 425 531 IPR029047 -
Mtr5g0082 572 Gene3D - 93 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0082 Mtr-Chr5 819911 822982 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0082 29 521 Calmodulin-binding Proteins AT3G12580 37.177 1.12e-102 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0082 K09489 - gmx:100809773 970.689