Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0081 ATGTCTTTAGCTATGTTTCTACCATGCATTATTCTTGTACTAATTTCATCACTAAATGTCTTATATGCCATAGACTTAAAATCAAGCATCACTGCTGGTTCAAATTCAACTTGGAAATCACCTTCTGGCTATTTCGAATTCGGATTCTACCCTCTTCCCAATGGTCTTTTTCTACCAGGAATATGGTTTGCAAAAATCCCACAAAAAACATTTGTATGGTACCAAACTCCCTCAGTTGAAACAAATTCCTTACTCCAACTCACATCTGAAGGACACCTTCTGATAACATATCCTAATGGAACCACTTCTCATACCATAGACAACATTGGAGGATATAGTGAAGCTGCAAATTCTGCTTATATGCAAGACGATGGAAATTTCGTCTTGAAAGACTCCAACCTAAGAACTGTTTGGGACAGTTTTAATTCTCCATCTAACACAATCTTACCTGGACAAACCTTGAAAAGCAATCAAATTCTTTATTCTAAAGGAAAAGGTGATTCAAACTACTCAATGGGAAATTTCATGCTTGAAATGCAGGCTGATGGTAACTTGATCCTCAAGGCACACCAATGGTCAGATCCTTCATACTGGTACACTTCAACTTTAGTCTCAAATTTGAGTTTGGTTTTCAATGAAACTAGTTCTTTATTGTATCTTGCAACTGGAATTGGAAACATTATTTACTCATTAACAAAAAGTACTCCAACTCCAGTAAAAGATTACTATCACCGCGCTACAATTGATGAAAATGGCAATTTCCAACAATATGTGTATCACAAAAGAAATGGAACAAATTGGGAAAGGGTTTGGAGAGCTATAGATGATCCATGTAGAGTGGATTATGTTTGTGGAATTTATGGTTTATGCACTTCTCCTGATAATGAATCAGTGAATTGTGAGTGTATTCAAGGTTATATTCCATTGGATCAAGAAGATGTGTCTAAAGGGTGTCGTCCGAAAACTGTAATCAATTATTGTAGTGGACCTTCAATGATGAATTTTGAGCTGCGTGTGTTTGATGACACTGATTTTCAATTTTATCCTGATTTTGCTCTCATTAATGATGTTGATTTGGAAAGTTGTAAGAAATCTGTGATAGATGATTGCAATATCATTGCTGCTACTTATAATTCTTCAACTTCAACATGTGCTAAGAAGAGAATGCCGTTGCTGAATGCTAGAAACAGTTCATCTTCCAAGGGACAAAAAGCACTTCTCAAAGTTCCTTATAGTAATAATGAGTCCAACACAATTGAAGTTTCAAAGAACAAGAGTTTTAATGTGAGAGTTTTTTTGAAGGTTATGGTTGCAATTAGTGCAACTCTTGCATGCTTCTTTGGAGCTCTTGCTGCTTATTATCATCCTTTTGTAAAGAGACTAATAACAAGAAGAAAGAAGTATCTAAATGCAACAGCTATTGGAATCAACTTTAGAGAATTCACATTCCAAGAGCTGCATGAAGCAACAGATGGATTTAGTAGGATTCTTGGCAGGGGATCTTCAGGGAAAGTCTATCACGGTACTTTGATTATAGATGATACGGAAATTGGTATTGCAGTGAAGAAGCTTGAAAAGAAGATTGAGAAAAGTGAGAATGAGTTCATGACTGAGCTCAAAATTATAGGTCTTACACATCACAAAAATTTGGTGAAACTTTTGGGATTTTGCATGGAGGACAACCATAGACTACTTGTCTATGAGCTAATGCCAAACGGAGCGTTGTCAAGTTTATTGTTTGGAGAAGGAGAGAGACCTCAATGGAGTCAAAGGGTTGAAATGGCTCTTGGAATAGCAAGAGGCTTACTCTACTTGCATGAAGAGTGTGAAACGCAGATCATACATTGTGATATCAAGCCACAAAATGTGTTACTTGATGCTAATCATATTGCAAAGATTGCAGATTTTGGACTTTCCAAGCTTTTGAACAAAGATCAAACCAGAACAAGTACAAATTTTAGAGGGACAATAGGGTACATAGCACCTGAATGGTTAAGGAGTGCACCGATAACTGCAAAAGTTGATGTTTTCAGCTATGGAGTTATGCTACTTGAGATCATTTGTTGTAGGAGGCATGTTGAGTCATATATATCAGAATCATGA 2103 0.3638 MSLAMFLPCIILVLISSLNVLYAIDLKSSITAGSNSTWKSPSGYFEFGFYPLPNGLFLPGIWFAKIPQKTFVWYQTPSVETNSLLQLTSEGHLLITYPNGTTSHTIDNIGGYSEAANSAYMQDDGNFVLKDSNLRTVWDSFNSPSNTILPGQTLKSNQILYSKGKGDSNYSMGNFMLEMQADGNLILKAHQWSDPSYWYTSTLVSNLSLVFNETSSLLYLATGIGNIIYSLTKSTPTPVKDYYHRATIDENGNFQQYVYHKRNGTNWERVWRAIDDPCRVDYVCGIYGLCTSPDNESVNCECIQGYIPLDQEDVSKGCRPKTVINYCSGPSMMNFELRVFDDTDFQFYPDFALINDVDLESCKKSVIDDCNIIAATYNSSTSTCAKKRMPLLNARNSSSSKGQKALLKVPYSNNESNTIEVSKNKSFNVRVFLKVMVAISATLACFFGALAAYYHPFVKRLITRRKKYLNATAIGINFREFTFQELHEATDGFSRILGRGSSGKVYHGTLIIDDTEIGIAVKKLEKKIEKSENEFMTELKIIGLTHHKNLVKLLGFCMEDNHRLLVYELMPNGALSSLLFGEGERPQWSQRVEMALGIARGLLYLHEECETQIIHCDIKPQNVLLDANHIAKIADFGLSKLLNKDQTRTSTNFRGTIGYIAPEWLRSAPITAKVDVFSYGVMLLEIICCRRHVESYISES* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0081 700 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 695 - -
Mtr5g0081 700 Pfam D-mannose binding lectin 76 158 IPR001480 -
Mtr5g0081 700 Coils Coil 521 541 - -
Mtr5g0081 700 Pfam Protein kinase domain 495 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0081 700 PIRSF SRK 1 700 IPR024171 GO:0004674
Mtr5g0081 700 Pfam S-locus glycoprotein domain 240 308 IPR000858 GO:0048544
Mtr5g0081 700 ProSiteProfiles Protein kinase domain profile. 491 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0081 700 Gene3D Phosphorylase Kinase; domain 1 465 569 - -
Mtr5g0081 700 SMART blect_4 29 144 IPR001480 -
Mtr5g0081 700 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 695 - -
Mtr5g0081 700 ProSitePatterns Protein kinases ATP-binding region signature. 497 523 IPR017441 GO:0005524
Mtr5g0081 700 ProSiteProfiles Bulb-type lectin domain profile. 23 142 IPR001480 -
Mtr5g0081 700 SUPERFAMILY Protein kinase-like (PK-like) 468 693 IPR011009 -
Mtr5g0081 700 SMART serkin_6 491 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0081 700 Gene3D - 22 143 IPR036426 -
Mtr5g0081 700 Gene3D Transferase(Phosphotransferase) domain 1 570 699 - -
Mtr5g0081 700 SUPERFAMILY alpha-D-mannose-specific plant lectins 57 202 IPR036426 -
Mtr5g0081 700 Gene3D - 144 276 - -
Mtr5g0081 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0081 Mtr-Chr5 814522 817131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0081 463 696 Trihelix Transcription Factor Family AT1G70460 45.378 1.06e-58 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr5g0081 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0081 - - lang:109330973 1093.18