Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0068 ATGTCCTGTGCAGATGCTAAGCGTCTGGTTGGTATGCGATTCTCTGATTCTTTCGTAAAAAAATATATTTTCCATTGGCCATTTGAGATTGTTCCTGAAGATGATAAGGCCATGATTGCGGTGAACTATATGGGGGAAATGAAGAAATTATATCCCGAAGAAATCTCTGCCATGGTTATCACAAGGATGAAAGATACCGCTGCTGCTATGACTTATGGTCTGAAACACAAATTTATCTCGGTGAAAAATGTTCTGGTTGTCGACCTAGGCGGTGGGACACTTGACGTTTCCCTCGTTTCTATGGATGTCAATTCTTTTACTGTGAAATCCACTTATGGCAATCAACATCTTGGCGGTCAAGATTTTACCAACACAATGGTGAATCACTTAATCAAAGAATTAAGGAACAAGAACATAAAGTGTGATCTTAATGTAAGTCTCAAGGTTATCAGGAGGGTGAAAACAGTCTGCGAAGAGGCCAAAATAATTCTTTCAACAGCTGAGAAAGCTGAGATTCATCTTGACACTTTATGCAATGGTATCTGTGAGAGTTAA 555 0.3928 MSCADAKRLVGMRFSDSFVKKYIFHWPFEIVPEDDKAMIAVNYMGEMKKLYPEEISAMVITRMKDTAAAMTYGLKHKFISVKNVLVVDLGGGTLDVSLVSMDVNSFTVKSTYGNQHLGGQDFTNTMVNHLIKELRNKNIKCDLNVSLKVIRRVKTVCEEAKIILSTAEKAEIHLDTLCNGICES* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0068 184 SUPERFAMILY Actin-like ATPase domain 3 71 IPR043129 -
Mtr5g0068 184 Gene3D - 65 76 - -
Mtr5g0068 184 Gene3D Actin; Chain A, domain 4 118 181 - -
Mtr5g0068 184 Pfam Hsp70 protein 66 178 IPR013126 GO:0005524|GO:0140662
Mtr5g0068 184 ProSitePatterns Heat shock hsp70 proteins family signature 2. 86 99 IPR018181 -
Mtr5g0068 184 Gene3D - 5 58 - -
Mtr5g0068 184 Gene3D - 77 117 - -
Mtr5g0068 184 PANTHER HEAT SHOCK PROTEIN 70KDA 4 68 IPR013126 GO:0005524|GO:0140662
Mtr5g0068 184 PANTHER HEAT SHOCK PROTEIN 70KDA 65 181 IPR013126 GO:0005524|GO:0140662
Mtr5g0068 184 PANTHER SHOCK COGNATE 70 KDA PROTEIN 2, PUTATIVE, EXPRESSED-RELATED 65 181 - -
Mtr5g0068 184 PANTHER SHOCK COGNATE 70 KDA PROTEIN 2, PUTATIVE, EXPRESSED-RELATED 4 68 - -
Mtr5g0068 184 SUPERFAMILY Actin-like ATPase domain 83 181 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0068 Mtr-Chr5 675187 675741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0068 5 181 Calmodulin-binding Proteins AT1G56410 39.648 3.53e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0068 K03283 - mtr:MTR_5g005890 369.007