Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0067 ATGCCTTCCGTCTTCATGAAGAAATCCCTTGCTCATCATAGAGCAAAGCACCCAAGTATTGATTTACAAACTTCCATCTCCCGTGATCAGTTTGAAAGGATTAATTCTGTCCACTTCGCTGACTGTATGAAAACTATTGAGAAATGTTTGACCTATGCCAAGACAAATATCAAGGAGGTCGACGACATTGTACTTGTTGGTGGGTCAACCAGGATCCCAAAGATTGAATCACTTTTGACGAAATTATTTAAAGGCAAGCAGATTTTGAAGACCATTTACCCCGATGTGGCCGTAGCACATGGTGCTGTATACTATGCTGCAGTATTAAATGGTGATCAGAATGTTCCAACTGCGTATTTGAATGAGTGGAAGGTTAATGAAAGACATGATGGCTGTTGTGGGATGGCTGTTGTGGTTCCTAGGTGCAGTCCTCTTCCTATCTCCAAGGAAGCGAAGAATATCACAACGGTTCAAGATAATCAAAATGAAATGTGTTTGTTGATCTATGAAGGAGATGAACAAAGTGTTAACAGAAACACTAAACTAGGAGAATTAGAACTCCTTGGCATTCCTCCTGCTAAATGTGGTGTTCCCACTATCACTCTTGGCTTCGATATAAGTTCAGATGGTGCCTTAACTATTTCTGCAACAGAGAGCTCTTCTGGAACAAGCAACAAAATTACCATTGAAAATTTCAAGGGAAGATTTTCTGAAGAGGAGATCGAGAAGATGATTAACCAAGCTGCTAAGTACAAATCTGATGATGAGAAACACCAGAAGAATAAGGAGGCAGCAAATGAGCTTATTGAATATGCCACTGCCATGAAGCAAACAATTAATCCTGAGCTGTCAGTTAATGCAAAGGAAGAAATTGAAAGTGAGATCAATTTGGCTGTTGAATGCATGCCTAGAGAATTGCCACTTTGA 927 0.4002 MPSVFMKKSLAHHRAKHPSIDLQTSISRDQFERINSVHFADCMKTIEKCLTYAKTNIKEVDDIVLVGGSTRIPKIESLLTKLFKGKQILKTIYPDVAVAHGAVYYAAVLNGDQNVPTAYLNEWKVNERHDGCCGMAVVVPRCSPLPISKEAKNITTVQDNQNEMCLLIYEGDEQSVNRNTKLGELELLGIPPAKCGVPTITLGFDISSDGALTISATESSSGTSNKITIENFKGRFSEEEIEKMINQAAKYKSDDEKHQKNKEAANELIEYATAMKQTINPELSVNAKEEIESEINLAVECMPRELPL* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0067 308 SUPERFAMILY Actin-like ATPase domain 17 109 IPR043129 -
Mtr5g0067 308 PANTHER HEAT SHOCK 70 KDA PROTEIN 17 296 - -
Mtr5g0067 308 PANTHER HEAT SHOCK PROTEIN 70KDA 17 296 IPR013126 GO:0005524|GO:0140662
Mtr5g0067 308 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 125 289 IPR029047 -
Mtr5g0067 308 ProSitePatterns Heat shock hsp70 proteins family signature 3. 63 77 IPR018181 -
Mtr5g0067 308 Gene3D - 93 107 - -
Mtr5g0067 308 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 133 267 IPR029047 -
Mtr5g0067 308 Pfam Hsp70 protein 18 298 IPR013126 GO:0005524|GO:0140662
Mtr5g0067 308 Gene3D Actin; Chain A, domain 4 18 41 - -
Mtr5g0067 308 PRINTS 70kDa heat shock protein signature 60 76 - -
Mtr5g0067 308 PRINTS 70kDa heat shock protein signature 92 112 - -
Mtr5g0067 308 PRINTS 70kDa heat shock protein signature 197 213 - -
Mtr5g0067 308 Gene3D - 42 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0067 Mtr-Chr5 671194 673202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0067 19 302 Calmodulin-binding Proteins AT3G12580 44.369 1.83e-70 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0067 K03283 - mnt:21408990 227.639