Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0063 ATGGAAAAAAGAAGTGACTATTTCAAAGAACGAAATTGTCGCAAACCCAAACCCAATCTCAAAAAAATTGTCGCGAAGATGGAACAAACGATGTTACAAAACATTGTGACTGTGCTTCTTCTCCTTATGCTTCTTCTCATCTTCATTTTCCTTTTCTTTCTCTTCAAACCATGGCGCTTCTTTTTCTCTTCTCGTTTTCGTTCTTTCATCAAGGGTTCTGCTGATGAATTAGAGAGGCCATTAGTTGAAGATAATCAGAATAATATTAATAATAATAATAATGGATTATTATCTAGGGATTATGATCTTGAAGGTGCTTGTTATTATCCTAATGAAGTTAATTTTCGTTCTCCAAGAACACATGGACAAGCTCTTGTTCATAAACCAAGGCTTCATAATGTTCCTGTTTCCAATAATTTTCAACAAGGTGGTGCTGGTGTTGTTGCTGATAGTTTGGTTGTTGATGTAATCACTGAGGATGTTGGTGAAGTTGTTAAGGTTGTTGATCATGCTCCTGTTTTAGCTCAAATTCCAAAGAATGATTTTCGTAATGATACTAGATTGCAGGATTTTGTGGAGAAAGATATCAGCGATCAAAGAAGTTTTCTTACTCTCGAGGTTATCAGTGGTCCTTCTCGCGGACAACAATGGTCTGTTCAGTCGACGGAGTCTTCTCGTTTACCGTTGACGTTGGGACGGATTTTCCCTAGTGATTTTTTGATAAAGGATAATGAAGTGTCGGGGAAGCATGCTTTGATCAAGTGGAATTTGGATACGATGAAATGGGAGCTGGTGGATATGGGTAGCCTGAACGGAACACTGTTGAATTCTAAGTCAATCAATCGTCTGGACACTGAACGTAGGCATTGGGGAGATCCGATGAATCTTGCTAATGGAGATGTTATAACACTTGGAACAACATCGAAAATAATTGTTCATATCACTTCACAAAATCATCATCACATCCCCTTTGGAGTTGGTATGGCATCAGATCCCATGTCTTTGCGTCGAGGAGGAAAAAAACTTCCTATGGAGGATGTTTGCTACTATCAATGGCCTCTACCTGGACTGGATAAGTTTGGAATTTTTGGCATTTGTGACGGGCACAGTGGCGATGCGGCTGCCAAATTTGCTAGCAAACTTTTTCCCGAGATAATTTCTAGTATCTTGTCGGATTCATCAAGAAGGGAGAGGGTTTTGTCACTTCGTGATGCTTCTGATATTCTTCGAGATGCATTTTCTCAAACAGAGGCAGGCATAAATAACTCTTATGAGGGATGTACAGCAACAGTGCTTCTGGTGTGGGCTGACCGTGATGATAATTTCTATGCACAATGTGCAAATGTTGGAGATTCTGAATGCATTATGAGTGTTGACGGGCAACAAATCAAGATGACAGAAGATCACAAGATATCAAGTCATTCTGAAAGACTCAGAATGGAAGGGACAGGTGAACCATTGAAAGATGGGGAAACACGGCTATATGGTATAAATCTTGCAAGGATGCTTGGTGACAAATTCCTAAAACAGCAGGATTCCCGGTTCAGTTCAGAACCTTATATAAGTGAGGCTGTGCATATTCACCAATCAAGCAAGGCTTTTGCTCTTCTGGCTAGTGATGGGTTATGGGATGTCGTCAGTTCGAAGAAGGCGATTCAGCTAGTGCTTCAGGCGAGGGAGCGGTACAATACAGATAGAGAGAATACAGCAGAAAAGATTGCTAGTTTGTTGTTGAGTGAGGCTAGAACAAACAAAACCAAGGATAATACCTCTATAATATTCTTAGATTTTGATAGCTTTGATAGATTATCTTGTAAAGTTGAATCCTAG 1830 0.3984 MEKRSDYFKERNCRKPKPNLKKIVAKMEQTMLQNIVTVLLLLMLLLIFIFLFFLFKPWRFFFSSRFRSFIKGSADELERPLVEDNQNNINNNNNGLLSRDYDLEGACYYPNEVNFRSPRTHGQALVHKPRLHNVPVSNNFQQGGAGVVADSLVVDVITEDVGEVVKVVDHAPVLAQIPKNDFRNDTRLQDFVEKDISDQRSFLTLEVISGPSRGQQWSVQSTESSRLPLTLGRIFPSDFLIKDNEVSGKHALIKWNLDTMKWELVDMGSLNGTLLNSKSINRLDTERRHWGDPMNLANGDVITLGTTSKIIVHITSQNHHHIPFGVGMASDPMSLRRGGKKLPMEDVCYYQWPLPGLDKFGIFGICDGHSGDAAAKFASKLFPEIISSILSDSSRRERVLSLRDASDILRDAFSQTEAGINNSYEGCTATVLLVWADRDDNFYAQCANVGDSECIMSVDGQQIKMTEDHKISSHSERLRMEGTGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISEAVHIHQSSKAFALLASDGLWDVVSSKKAIQLVLQARERYNTDRENTAEKIASLLLSEARTNKTKDNTSIIFLDFDSFDRLSCKVES* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0063 609 Pfam Protein phosphatase 2C 337 590 IPR001932 -
Mtr5g0063 609 SUPERFAMILY PP2C-like 338 599 IPR036457 -
Mtr5g0063 609 CDD FHA 203 308 IPR000253 GO:0005515
Mtr5g0063 609 SMART FHA_2 228 280 IPR000253 GO:0005515
Mtr5g0063 609 PANTHER PROTEIN PHOSPHATASE 2C 62 608 IPR015655 GO:0004722|GO:0006470
Mtr5g0063 609 Gene3D - 334 605 IPR036457 -
Mtr5g0063 609 Pfam FHA domain 230 305 IPR000253 GO:0005515
Mtr5g0063 609 PANTHER PROTEIN PHOSPHATASE 2C 70 62 608 - -
Mtr5g0063 609 SUPERFAMILY SMAD/FHA domain 201 312 IPR008984 GO:0005515
Mtr5g0063 609 CDD PP2Cc 337 597 IPR001932 -
Mtr5g0063 609 Gene3D - 197 333 - -
Mtr5g0063 609 ProSiteProfiles Forkhead-associated (FHA) domain profile. 229 280 IPR000253 GO:0005515
Mtr5g0063 609 SMART PP2C_4 319 595 IPR001932 -
Mtr5g0063 609 ProSiteProfiles PPM-type phosphatase domain profile. 325 597 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0063 Mtr-Chr5 643089 648656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0063 34 599 PP2C-type Phosphatase Gene Family AT5G19280 53.859 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0063 K01090 - gmx:100170643 788.104