Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0047 ATGAGTTTGATTCGGACGGAGGAGAAAGGCTCTGTAAATTTACTATTTTCCATTGGTCATCAGATAAATAGTGAGTCCATGATTCTTCCATTTATCCTCGTCCTCGCCTTATTTGACTTTGACAATGTTTTGCTTTGGACACATGAAATTTCCTTAGTTTCACACAAAATTTGGTTTTGTGACGCCATTGACATTTTCTATTATCTTAACACAAGACTTTTTTTATTATTTTTTTATTTCTATTGCCTTCTTCCTCCATCCACGCAACCACAACGCAAAAACTCAAATTCAAAAATGGCTACCCTTGCAAAACTTCTTTCCTCCATTTGTGTATGTGTTATCGTCATGTTAACAACAAAAGCAGTTGAAGCAACACCAACATACACAGCCACTCACTGCACAAACACAACCACTTATGCACCCAACTCCACTTTCCAAACAAACCTTGACATCCTCTTATACTATTTCTCCAATAATATCTCTCAATCCAACGGTTATTTTCTCGGCATCACTGGTTTCAATAGCGTCAACGCCGTCGGTGGACTCTTCCTATGTCGTGGCGACGTCGCCACCACCGTATGTAACCAGTGTCTCACAACTGCAATCAAAGAGATAAGACAGCATTGTCCAAACCAAACCGAAGCACTCATCTGGTACGACGAGTGCTTGGTTCATTACACAAATAGGTACTTTGCCGTCGACAAGATTGACCCTAGAGTCAACCTTAACGACGGAAATATTGTCTCTAGCGTTGACTTGGGACGTTTCAACCAATCTCTGCATGGGTTGTTGAATGATTTGGCAACAGAAGCCTCCGGGAGTTCTGAGTCGAAGAAGTTTGCCGCCGGTGAAGTAGTGGTGACGGAGTCCATGACGGTGTATGGATTGATGCAGTGCACGAATGACTTAACGAATAGTGAATGTGGGACGTGTTTGAAAAATGCTATTGGAACTATTCCTAATGGAAAACAGGGTGCAAGAGCTTTGCTTCCTTCTTGTAATGTTAGATATCAACTCTACCCTTTTTTCACTTCATCTTCGCCTTCATCTTCAGGGGGAATGAAACTTGGACCTGGCACAATTGCGGTCGTGGTTGTCGTGCCCATTTTTTTCCTAATTATCTTATTTCTAGGTTGCTACTATTTCAAGAGAAGGTCAAAGAAGAAGATACTATTGCCAAGTATAATGGAAAATTTTGGTGATGAATTTCCAACATTGGAGTCATTGCAATTCAATTTGGCTACACTAGAAGCAGCAACTAACCAGTTCTCATTGGCGAATAAGATAGGAAGTGGAGGATTTGGAGAAGTTTACAAGGGGGTTTTGTTAGATAGCAGACAAATAGCCGTAAAAAAACTTTCAAAAACTTCAGGACAAGGCACAATAGAATTTAAAAATGAGATTGTGCTAATAGCCAAACTCCAACATAGGAACTTGGTAACCTTGTATGGATTTTGCTCGGAAGAACAAGAAAAAATGCTTGTTTATGAATATGTACTAAATAAAAGTCTTGATTACTTCTTATTTGATCCTCATAAGGAAAGAGTCTTGAGTTGGCGTGAAAGATATAATATCATAGGTGGTATTGCACGAGGGATTCATTACTTACATGATCAATCAAGACTTAAAGTCATACATCGTGATCTCAAACCTAGCAATATATTGTTAGATAAGAATATGAATCCAAAAATATCAGACTTTGGTATGGCAAAAATGATTGATATAGATGAACATCAAGGAAATACTAAGAGAATTGCTGGAACTTATGGTTATATGTCTTCCGAATATGCAATGCATGGACATTATTCAGAAAAATCAGATGTGTTTAGCTTTGGAGTGATAATTATAGAGATAATTAGTGCAAAGCGGAATGCCCTTAGTCTTCATTCACTGGATTTTGATGACCTCTTGAGTTATGCTTGGAAAAATTGGAGGGATGAAAAATCTTTAGAAATATTGGATTCTAATATAGAAAAATCATATTCTTATATTGAAGTCATAAGATGCATTCAAATTGGTTTATTATGTGTGCAACAAAATCCAGATGATAGACCAACAATGGAAAGAATTGTTTCATATCTGAGTAATGTTTCAGTTGAGTTACCATTGCCTCAAGAGCCTGGAGGTTTCATGGGTAATAGAACGAATCAAATACCAAGGGATAACATTTCGGATCAACGTAATAATAGCAATACTACGGGATCCTCAGTCAATGATATCACCATGAATAATTCTTTTCCTAGATAG 2247 0.3774 MSLIRTEEKGSVNLLFSIGHQINSESMILPFILVLALFDFDNVLLWTHEISLVSHKIWFCDAIDIFYYLNTRLFLLFFYFYCLLPPSTQPQRKNSNSKMATLAKLLSSICVCVIVMLTTKAVEATPTYTATHCTNTTTYAPNSTFQTNLDILLYYFSNNISQSNGYFLGITGFNSVNAVGGLFLCRGDVATTVCNQCLTTAIKEIRQHCPNQTEALIWYDECLVHYTNRYFAVDKIDPRVNLNDGNIVSSVDLGRFNQSLHGLLNDLATEASGSSESKKFAAGEVVVTESMTVYGLMQCTNDLTNSECGTCLKNAIGTIPNGKQGARALLPSCNVRYQLYPFFTSSSPSSSGGMKLGPGTIAVVVVVPIFFLIILFLGCYYFKRRSKKKILLPSIMENFGDEFPTLESLQFNLATLEAATNQFSLANKIGSGGFGEVYKGVLLDSRQIAVKKLSKTSGQGTIEFKNEIVLIAKLQHRNLVTLYGFCSEEQEKMLVYEYVLNKSLDYFLFDPHKERVLSWRERYNIIGGIARGIHYLHDQSRLKVIHRDLKPSNILLDKNMNPKISDFGMAKMIDIDEHQGNTKRIAGTYGYMSSEYAMHGHYSEKSDVFSFGVIIIEIISAKRNALSLHSLDFDDLLSYAWKNWRDEKSLEILDSNIEKSYSYIEVIRCIQIGLLCVQQNPDDRPTMERIVSYLSNVSVELPLPQEPGGFMGNRTNQIPRDNISDQRNNSNTTGSSVNDITMNNSFPR* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0047 748 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 108 727 - -
Mtr5g0047 748 SUPERFAMILY Protein kinase-like (PK-like) 409 707 IPR011009 -
Mtr5g0047 748 ProSitePatterns Protein kinases ATP-binding region signature. 429 452 IPR017441 GO:0005524
Mtr5g0047 748 ProSiteProfiles Gnk2-homologous domain profile. 127 231 IPR002902 -
Mtr5g0047 748 MobiDBLite consensus disorder prediction 710 748 - -
Mtr5g0047 748 ProSiteProfiles Protein kinase domain profile. 423 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0047 748 Gene3D Phosphorylase Kinase; domain 1 394 498 - -
Mtr5g0047 748 Gene3D - 240 342 IPR038408 -
Mtr5g0047 748 Gene3D - 126 231 IPR038408 -
Mtr5g0047 748 ProSiteProfiles Gnk2-homologous domain profile. 236 342 IPR002902 -
Mtr5g0047 748 Pfam Protein kinase domain 425 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0047 748 SMART serkin_6 423 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0047 748 Gene3D Transferase(Phosphotransferase) domain 1 500 701 - -
Mtr5g0047 748 MobiDBLite consensus disorder prediction 705 748 - -
Mtr5g0047 748 Pfam Salt stress response/antifungal 133 228 IPR002902 -
Mtr5g0047 748 Pfam Salt stress response/antifungal 254 339 IPR002902 -
Mtr5g0047 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 544 556 IPR008271 GO:0004672|GO:0006468
Mtr5g0047 748 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 108 727 - -
Mtr5g0047 748 CDD STKc_IRAK 429 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0047 Mtr-Chr5 466697 471015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0047 113 748 Receptor kinase-like Gene Family AT4G05200 43.946 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr5g0047 Pkinase 4.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0047 - - cam:101500396 965.681