Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0036 ATGCGAGGAAACGTCACCGGTAACGCCAATGGCAGCGATGACCGGTGGGGAACAGCTGCTGCCGCCGTTCCAGCAATTCGGAAGAAAGGTACAAGTGTTCGTCAATGGCTGGTAGTCGACGGCACCGGCGAAGCACAGGTGATCGAGGCCGGAAAACACGCCATCATGCGTCGTACCGGCCTCCCTGCACGTGACCTTCGAATCCTCGACCCTCTCCTCTCCTACCCTTCTACCGTTCTCGGAAGAGAAAGAGCAATCGTCATCAACTTAGAACACATCAAAGCAATTATCACCGCAAACGAAGTTCTTCTTCTCAATTCACGCGATCCTTCTGTTACTCCTTTCGTTCAAGAGCTTCAAGCCAGGATTCTTCGTCATCACGAAGCTACCACTACTCCTCTTCCTGATAATCAGGAAGATTCTCACGGTGGAATTAAGATTCTTCCATTTGAATTCGTTGCACTTGAAGCTTGTCTTGAAGCAGCTTGTAGTGTTTTGGAGAGTGAAGCGAAGACGTTGGAACAAGAAGCGCATCCAGCTCTTGATAAATTGACTTCGAAGATTAGTACTCTCAATTTGGAACGTGTTCGTCAGATTAAGAGCCGTTTGGTTGCGATTACTGGGAGGGTTCAAAAAGTGAGAGATGAATTGGAACATTTACTTGATGATGATGAAGATATGGCGGAGATGTATCTTACTGAGAAGTTACTTCAACAGCAATTGGAACAAACCTCTGATGAAGACACTGTTGAAACTCCTGATCATGATGTTGATGATAATGGTGTTGATATTAATCAAAGTGTACCGGCTGCTGAGATTTCGTTGGAAGCGGGTGTAGGAGGGGGGGTGAATTATGTGGAGGAAGATGAGGATAATCTCAATTCTAGAGAGCAAATGTTTGGTGCTTCAAATTTAAGGGATAGCCGCGGAACACGTGCAAGTACTACTTACAGTGTCACCACCACTAAGCTTGATGTTGAGGAGCTTGAGATGCTCTTGGAAGCTTACTTTGTTCAGATTGACGGCACTCTCAATAAGCTCTCAACGCTGAGGGAGTATGTTGATGACACGGAGGATTATATCAACATTATGCTTGATGACAAACAGAACCATCTTCTCCAAATGGGAGTCATGTTGACCACGGCAACTCTGGTGGTAAGTGCCTTCGTTGTTGTCGCTGGTATTTTTGGCATGAATATTAATATTGAACTGTTTGATAAGAATTTGTATGGGATGAGAGAGTTTATGTGGACTGTTGGTGGTGGCACTGCTGGGACCATATTCTTGTATGTGGTTGCTATTGCCTGGTGCAAGCACAAACGCTTGCTGGAGTGA 1335 0.4562 MRGNVTGNANGSDDRWGTAAAAVPAIRKKGTSVRQWLVVDGTGEAQVIEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITANEVLLLNSRDPSVTPFVQELQARILRHHEATTTPLPDNQEDSHGGIKILPFEFVALEACLEAACSVLESEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKLLQQQLEQTSDEDTVETPDHDVDDNGVDINQSVPAAEISLEAGVGGGVNYVEEDEDNLNSREQMFGASNLRDSRGTRASTTYSVTTTKLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNINIELFDKNLYGMREFMWTVGGGTAGTIFLYVVAIAWCKHKRLLE* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0036 444 CDD Mrs2_Mfm1p-like 36 442 IPR039204 -
Mtr5g0036 444 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 142 444 - -
Mtr5g0036 444 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 25 131 - -
Mtr5g0036 444 Gene3D - 22 107 - -
Mtr5g0036 444 Coils Coil 156 176 - -
Mtr5g0036 444 Gene3D Magnesium transport protein CorA, transmembrane region 111 372 - -
Mtr5g0036 444 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 25 131 IPR039204 -
Mtr5g0036 444 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 142 444 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0036 Mtr-Chr5 353160 355742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0036 36 444 MRS2 Gene Family AT3G19640 64.430 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0036 - - qlo:115968071 567.385