Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0026 ATGGGTCACTCCAATGTCTGGAACTCTCACCCCAAGACCTATGGTCCTGGTTCTCGTACATGCCGTGTGTGTGGAAACTCTCATGGATTGATCAGGAAGTACGGACTCATGTGTTGCAGACAGTGCTTCCACAGCAATGCCAAGGAAATTGGCTTCATTAAGGTTAGCACGATTCTTTGA 180 0.4778 MGHSNVWNSHPKTYGPGSRTCRVCGNSHGLIRKYGLMCCRQCFHSNAKEIGFIKVSTIL* 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0026 59 Pfam Ribosomal protein S14p/S29e 7 56 IPR001209 GO:0003735|GO:0005840|GO:0006412
Mtr5g0026 59 PANTHER RIBOSOMAL PROTEIN S14P/S29E FAMILY PROTEIN-RELATED 1 54 - -
Mtr5g0026 59 Gene3D 30s Ribosomal Protein S14; Chain N 1 56 IPR043140 -
Mtr5g0026 59 PANTHER 40S RIBOSOMAL PROTEIN S29 1 54 IPR039744 GO:0003735|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0026 Mtr-Chr5 279442 281344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0026 1 54 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 92.593 2.44e-33 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0026 K02980 - han:110916663 126.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0026 5 279442 281344 Mtr1g4037 1 51983357 51984414 PCT