Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g5032 ATGGCAATAGCAGCAGCAACATCATCACCTAACATGAGCAGCATGAGCTTGAGTCACGAAGATGGAACTTCTAACGATAATATTAACAAAGGAGCTACAGCTACAGTTACAGTAGTAGATGATGATGATGATGCTGATGATGATCACGAGCATGACGTGGTTATGCCAGGGTTTCGTTTCCATCCAACTGAAGAAGAACTTGTAGAGTTCTACCTTCGCCGTAAGGTCGAGGGAAAACGTTTCAACGTTGAGCTTATTACTTTTCTCGATCTTTATCGCTATGACCCTTGGGAACTTCCTGCTTTGGCAGCAATCGGAGAGAAGGAGTGGTACTTTTATGTGCCTCGAGATAGGAAGTATCGAAACGGTGATCGTCCAAATCGTGTAACAACTTCTGGTTATTGGAAGGCAACAGGAGCGGATAGGATGATTCGAACTGAAAACTTCCGTTCAATTGGACTCAAGAAAACCCTAGTTTTCTATTCTGGAAAAGCTCCTAAAGGCATCCGAACCAGTTGGATTATGAATGAGTATAGATTACCCCAACATGAAACCGAACGATATCAAAAGGGTGAGATATCCCTATGTCGTGTATACAAGAGAGCAGGAGTAGAAGATCATCCCTCCCTCCCTCGTTGTCTCCCAATTACACGACCATCATCATCATCATCATCAAGAGGTACTACTGCTTCACATTCAGACAAGAATAAGCAGCAAAATGAAATATTGGGAATGGGATTTGTTGTTGGACAATCACCAAAGACAATTGATGATCACATAGTTAACAAAATGGAAGGAAGCAGTAGCGGCGGTAATTCAGATCATGTCACAACAACTCTTGGGCTTTCCAAGTATAGCAATACTCCTCCTCCTACTAATTACCGTTCAGAAGAAGAAGAAGGATTGATGATTATGCAGCAGCAGCAGCATCAACCTAGGCACCTAGTACAATATTCAGCTGCGGGAAACTCTCTGTTAGTCTCCGCTGGTGGCGGCGGGGGCGTCATTTTCCCTGTCTCAGCTTCAGCAGCAGCAGCAGTGAGCTGTTCCAATACTGCTACCAGTGCTGCAATGATGATGGATGATCTCAATAGGCTTGTAAGTTATCAACAACAGCAATATTGTTACAATGTTCAAAACCCACATCTCAATCATCCAAATCCGAATCATTTGTCTACATTGCTGATGCAACCAATGTTACCAAATCAATTTCCAACTACCTTCTCTGACCGACTGTGGGACTGGAATCCAATCCCTGAGGATCATAATCACCCCAACAGTAGTAACAACACCTCCTTCAAGTAA 1305 0.433 MAIAAATSSPNMSSMSLSHEDGTSNDNINKGATATVTVVDDDDDADDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKGEISLCRVYKRAGVEDHPSLPRCLPITRPSSSSSSRGTTASHSDKNKQQNEILGMGFVVGQSPKTIDDHIVNKMEGSSSGGNSDHVTTTLGLSKYSNTPPPTNYRSEEEEGLMIMQQQQHQPRHLVQYSAAGNSLLVSAGGGGGVIFPVSASAAAAVSCSNTATSAAMMMDDLNRLVSYQQQQYCYNVQNPHLNHPNPNHLSTLLMQPMLPNQFPTTFSDRLWDWNPIPEDHNHPNSSNNTSFK* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g5032 434 ProSiteProfiles NAC domain profile. 54 201 IPR003441 GO:0003677|GO:0006355
Mtr4g5032 434 Pfam No apical meristem (NAM) protein 56 180 IPR003441 GO:0003677|GO:0006355
Mtr4g5032 434 PANTHER NAC DOMAIN-CONTAINING PROTEIN 72-LIKE 37 423 - -
Mtr4g5032 434 SUPERFAMILY NAC domain 53 200 IPR036093 GO:0003677|GO:0006355
Mtr4g5032 434 Gene3D NAC domain 63 204 IPR036093 GO:0003677|GO:0006355
Mtr4g5032 434 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 37 423 - -
Mtr4g5032 434 MobiDBLite consensus disorder prediction 208 241 - -
Mtr4g5032 434 MobiDBLite consensus disorder prediction 1 29 - -
Mtr4g5032 434 MobiDBLite consensus disorder prediction 215 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g5032 Mtr-Chr4 64481758 64484417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g5032 1 226 NAC Transcription Factor Family AT2G02450 74.236 2.72e-111 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr4g5032 NAM 4.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g5032 - - mtr:MTR_4g134460 780.4