Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g5016 ATGAACAAAACATTATATGTGATGCCAACTAAGCATGATATTAAAGATGTTGAGTGCTTGCACTACTACGATGATGAAATCTCCAGTTGTGGTTGTGGTTTTATTGGGTTCAAGAAAAGCCAAGTATTTGATTACAATTTCGGAGACGACGACGATGATGGTGATTCAGAAGAGCTGTTTGAGATAAATATGAAGAAGGAAAGTAGATTGGATTCAATAAGAGAAGAAGAGTGGTGTGAGAGCAGTACTGTGTTCTCTCTAGATATACACAATTATTTAGATGATGTTGTTTATGTGGCAGTGGGAACAAATATTAATGGTGGAAGTTCAAGCATGGAAGCACTTTCATGGACCTTGAAACATGCCGTGACACCAGAAACAACTACTGTTTATCTCCTACACGTTTTCCCTCAAGTCAAACTAATTCCAACTCCATTGGGAAAGATTCCAAGGAGTCATGTAAATGTAGAGCATGTTAACATCCACTTGACCCAAGTGAAAAGCAAGAGGAAATTGCTCCTTCAGAAGTTCATGAAGCTATGTATTGAATCAGAGGTTAAGGTAGAAATGATGCTTATTGAGGGTGACAACGTTGGTGAAGCCATTGTGGACCTTGTAGGGAATCTAAATATAAGGAAATTGGTGATTGGAACTACCCAATCTAATCTAAGCAAAAAAGGGCCAGGAAAGCAAAATTCCATTGCGGACATGGTGTTAAAAACCGTACAAGAAAGTTGTGATGTCAAAATCATATGTGAAGGAAAAGAAGTAATCGATCAGATGATTAATGGGTTCAGTACTTCAAAACACACCAGAAACAGAAACAGTAGCAGTTCCACAATTTCTCATCAAGTTAAGGAATCCCATGGTTTTGTCCCACTCAAGCTTTTCATGCCCAATCTATCTTGGTTATTTAGGTCCAGATTTTTATCACCAAGATGA 942 0.38 MNKTLYVMPTKHDIKDVECLHYYDDEISSCGCGFIGFKKSQVFDYNFGDDDDDGDSEELFEINMKKESRLDSIREEEWCESSTVFSLDIHNYLDDVVYVAVGTNINGGSSSMEALSWTLKHAVTPETTTVYLLHVFPQVKLIPTPLGKIPRSHVNVEHVNIHLTQVKSKRKLLLQKFMKLCIESEVKVEMMLIEGDNVGEAIVDLVGNLNIRKLVIGTTQSNLSKKGPGKQNSIADMVLKTVQESCDVKIICEGKEVIDQMINGFSTSKHTRNRNSSSSTISHQVKESHGFVPLKLFMPNLSWLFRSRFLSPR* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g5016 313 Gene3D HUPs 95 256 IPR014729 -
Mtr4g5016 313 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 106 223 - -
Mtr4g5016 313 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 8 306 - -
Mtr4g5016 313 Pfam Universal stress protein family 106 225 IPR006016 -
Mtr4g5016 313 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 8 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g5016 Mtr-Chr4 64330296 64332260 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g5016 97 267 Plant U-box Gene Family AT5G57035 26.857 4.20e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g5016 - - pvu:PHAVU_003G088000g 322.783