Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g5015 ATGTCGTCGGCCAAGTCAACGGAGATCATGGAGCAACATTCACACTCATCCGAAATAATGTTGAACAACAACAATGAGATTGAGGAGGTAGATGACAGCATTGAAACCTTTGATGATGATGAAATTGAACAAGCTGCTGAGTCATGTGTTTATGTGGCAGTTGGTAAAAGCAATACAAGCATGGAAGCACTTTCATGGACACTCACTAACTTATTCCCTATTACTCACTCTACCAATAACACCATTCTCTATCTCATACATGTGTTTCCTGAAATCAAACACATTCCAAATCCATTGGGAGTAGGGATGGTTCCAAGGAATCAAGTGAGTGTTGAGCAGGTGGAGAGTTATATGGAACAAGAAAAAGATAAGAGGAGACAACTCCTTCACAAATTCCTCCAATCTTGCTCTCTTTCAAAGGTTAAGGTGGATACCATCCTAATAGAGAGTGACTTTGTTGCAAAGGCCATCCTCGACCTTATTCCAATTCTTCAAATCAACAATTTAATCATTGGAGCAAACAAATCCCATCTAATTAGAAAATCAAAATCAAAGAAAGGAAGTGGCGGTGTGGGCGATCAAGTACTAAAGAGTGCACCAGAAAGTTGCAAGGTTAGAATTATATGTGAAGGGAAGGAAGTAAATGAGCAAATGATGTTATCCTCACCCTCTCCTCAGATATTTACTGCTACCAATGATGATACTTTTGTCAACACTAAAGAAAATGATTCAGTTTTATGTTGTTTCAAGCCCAAGTTTAAATGA 765 0.3856 MSSAKSTEIMEQHSHSSEIMLNNNNEIEEVDDSIETFDDDEIEQAAESCVYVAVGKSNTSMEALSWTLTNLFPITHSTNNTILYLIHVFPEIKHIPNPLGVGMVPRNQVSVEQVESYMEQEKDKRRQLLHKFLQSCSLSKVKVDTILIESDFVAKAILDLIPILQINNLIIGANKSHLIRKSKSKKGSGGVGDQVLKSAPESCKVRIICEGKEVNEQMMLSSPSPQIFTATNDDTFVNTKENDSVLCCFKPKFK* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g5015 254 Gene3D HUPs 41 220 IPR014729 -
Mtr4g5015 254 CDD STK_N 50 211 - -
Mtr4g5015 254 MobiDBLite consensus disorder prediction 1 21 - -
Mtr4g5015 254 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 3 253 - -
Mtr4g5015 254 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 3 253 - -
Mtr4g5015 254 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 52 199 - -
Mtr4g5015 254 Coils Coil 111 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g5015 Mtr-Chr4 64328186 64329553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g5015 45 236 Plant U-box Gene Family AT5G57035 28.125 5.89e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g5015 - - gmx:100527773 263.077