Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4998 ATGGGCAGTGATGAAACTCAACAGCTATTGCTTTCAGAGTCAAGGGAACATTCTCTTCTCAATGAGAAGAATGACCTTCTTCAGAGAAGAAAACCGCGGTGTGGCGGCACTTCAGAGACAGATATCAATCTGCAGCAAGAACAGAATGGTGTCCTCCAATCCCCTTTATCTCCCCAATGTATAACTGAAAAACAAGAAGCAGAATTCAAGTTCAGGCTAGTGTTCTTGTGTTTAGCAGCATACCTAGGCACAGGTACCTTATGTTTCTATCTAACAAGTTACCAAATTGAAGGCATAAAAACAAATGGATTTCTTGATGCCCTTTATTTCTGTGTTGTGACAATGACTACTGTTGGATATGGAGATCTTGTTCCAAATAGCACTATAGCAAAACTCCTTGCATGCATTTATGTCTTCACTGGCATGGCTCTTGGTGGCTTAATTCTTAGCAAAGCAGCAGATTACATTGTTGAGAAACAGGAAATATTTCTTGCTGAGTCCATGTGCAAGGCTGAAAATTTTGGTCTACAAGAGGTTGCTAAAGAACTTGGAACTAAGAAAAGCAAATACAAGTTTGTGCTTGCAGTAGCCACTTTTTTTGTGCTCATGATTGCAGGAACTGTTTTTCTGTATTTTATTGAGAATCTAGATTTTGTGGATGCACTCTATTGTGTTTGTTCCACGGTCACAACTTTAGGTTATGGGGATAAGAGCTTCTCGACTGCTGCTGGTAGGATTTTTGCCGTGTTTTGGATATTGAGCAGCACCATTTGCTTGGCTCAGTCTTTTGCTTATCTTGCTGAACTCTATACTGAAGATAGACAAAGATCACTGGCAAAAATGGTTCTCACCCGAAAATTATCACTCAGTGATCTTGAGGCAGCAGATCTTGACGGAGACAAAGCTGTCAGTGCTGCAGAGTTTGTTGTATACAAGTTGAAGGAAATGGGAAAGATCAACCAAGAAGATATTTCAGCAGTGATGGAGAGTTTTAGAAAACTAGACTGTGATCAATCAGGAACTCTGACTGAAGCTGATATCAGAAATTCTGAACTATCTTAA 1062 0.3992 MGSDETQQLLLSESREHSLLNEKNDLLQRRKPRCGGTSETDINLQQEQNGVLQSPLSPQCITEKQEAEFKFRLVFLCLAAYLGTGTLCFYLTSYQIEGIKTNGFLDALYFCVVTMTTVGYGDLVPNSTIAKLLACIYVFTGMALGGLILSKAADYIVEKQEIFLAESMCKAENFGLQEVAKELGTKKSKYKFVLAVATFFVLMIAGTVFLYFIENLDFVDALYCVCSTVTTLGYGDKSFSTAAGRIFAVFWILSSTICLAQSFAYLAELYTEDRQRSLAKMVLTRKLSLSDLEAADLDGDKAVSAAEFVVYKLKEMGKINQEDISAVMESFRKLDCDQSGTLTEADIRNSELS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4998 353 Gene3D - 57 173 - -
Mtr4g4998 353 SUPERFAMILY Voltage-gated potassium channels 184 285 - -
Mtr4g4998 353 Pfam Ion channel 77 157 IPR013099 -
Mtr4g4998 353 Pfam Ion channel 199 270 IPR013099 -
Mtr4g4998 353 PRINTS Two pore domain K+ channel signature 113 141 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mtr4g4998 353 PRINTS Two pore domain K+ channel signature 230 239 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mtr4g4998 353 SUPERFAMILY Voltage-gated potassium channels 69 158 - -
Mtr4g4998 353 SUPERFAMILY EF-hand 292 349 IPR011992 -
Mtr4g4998 353 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 18 347 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mtr4g4998 353 Gene3D - 174 277 - -
Mtr4g4998 353 Gene3D - 284 352 - -
Mtr4g4998 353 ProSitePatterns EF-hand calcium-binding domain. 296 308 IPR018247 -
Mtr4g4998 353 ProSitePatterns EF-hand calcium-binding domain. 335 347 IPR018247 -
Mtr4g4998 353 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 18 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4998 Mtr-Chr4 64162530 64165585 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4998 53 347 Ion Channels AT5G55630 57.627 4.97e-120 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4998 K05389 - gmx:100799492 496.893