LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr4g4997	ATGAAGTTCCACTACCTATCATTGTTCCTTCTTGTGATCATCTTAGAGCTAAGCACCAATGTCTATGGTCTCATGCCTAAAAGATCATTGAAGCCCTTATTACCACCTCCTGAAGCCTTGCTTTCCATTGGTCACTATCATTCAACATGTCCAGATGCTGAAGGCATTATCTCACAAAAAGTTTTTGCTTGGGTTAAGAAGGACCCCACCTTGGCACCATCCATCATCCGCTTGCATTTTCATGACTGTGCCGTTAGAGGATGTGATGGATCAATTTTACTTAACCATGTGGGAAGTGAGAGAACTGCTTTTGCGAGTAAAACCTTGAGAGGGTTCCAATTGATTGATGAAATCAAAGCTGAACTAGAGAGAAGGTGTCCAAGAACAGTGTCATGTGCTGACATTCTCACTGCTGCTACAAGAGATGCAACCATTTTAGCAGGAGGACCATTTTGGGAAGTTCCATTCGGCCGAAAAGACGGCAAGATTTCAATAGCCAAAGAAGCCAATTTGGTTCCACAAGGACATGAAAATATCACAGGTTTGATTGGATTTTTTCAAGAAAGAGGACTTGACATGCTTGATTTGGTTACTCTCTCAGGTTCACACACAATTGGGAGAAGCACTTGTTATTCTGTTATGAATAGGATTTACAATTTCAATGGAACTGGTAAACCTGACCCATCACTTAACATCTATTACTTGAAGATGTTAAGGAAAAGATGTAAAAAGGATTTGGATTTGGTTCACCTTGATGTTATAACACCAAGGACTTTTGACACAACCTATTACACAAACCTTAAGAGGAAGGCTGGATTGTTGTCAACAGATCAATTGTTGTTTTCAGATAAAAGAACATCTCCTTTTGTGGATTTATTTGCAACACAACCTTTTGTTTTTACAAGTCAGTTTGCTGTGTCAATGGTGAAGCTTGGGAATGTTCAAGTTTTGACCAGGCCTAATGAAGGTGAGATCAGAGTGAATTGCAATTATGTCAATCGTGTTTAA	1008	0.3948	MKFHYLSLFLLVIILELSTNVYGLMPKRSLKPLLPPPEALLSIGHYHSTCPDAEGIISQKVFAWVKKDPTLAPSIIRLHFHDCAVRGCDGSILLNHVGSERTAFASKTLRGFQLIDEIKAELERRCPRTVSCADILTAATRDATILAGGPFWEVPFGRKDGKISIAKEANLVPQGHENITGLIGFFQERGLDMLDLVTLSGSHTIGRSTCYSVMNRIYNFNGTGKPDPSLNIYYLKMLRKRCKKDLDLVHLDVITPRTFDTTYYTNLKRKAGLLSTDQLLFSDKRTSPFVDLFATQPFVFTSQFAVSMVKLGNVQVLTRPNEGEIRVNCNYVNRV*	336

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr4g4997	335	PRINTS	Haem peroxidase superfamily signature	72	86	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Mtr4g4997	335	PRINTS	Haem peroxidase superfamily signature	130	147	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Mtr4g4997	335	PRINTS	Haem peroxidase superfamily signature	148	160	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Mtr4g4997	335	PRINTS	Haem peroxidase superfamily signature	195	210	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Mtr4g4997	335	PRINTS	Haem peroxidase superfamily signature	252	267	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Mtr4g4997	335	PANTHER	PEROXIDASE	21	332	-	-
	Mtr4g4997	335	ProSitePatterns	Peroxidases proximal heme-ligand signature.	195	205	IPR019793	-
	Mtr4g4997	335	Pfam	Peroxidase	59	295	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Mtr4g4997	335	PANTHER	PEROXIDASE 25-RELATED	21	332	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Mtr4g4997	335	Gene3D	Peroxidase, domain 2	173	311	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr4g4997	Mtr-Chr4	64140280	64141728	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr4g4997	36	333	Peroxidase	AT1G30870	50.667	1.88e-107	316

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr4g4997	K00430		-	gmx:100792775	555.444

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