Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4990 ATGCAAATGTCTCAGCAAAGGCCAAATTCATCTGGTCTCGGTTTCTATCACCAACCTGCTCAGGGCATTTACCTACAAACCAATCTATGTGGTGATAGAGATGGTAGCAGCAGCCAGGGAACTGATCTTTCTTTCGAAACCTACAAGCCGCAACGCTTCACCCTGGAATCATACCCAGAAATCACCGGTTTCATTGACTGTGATTCTCCTTCCTATGCCAGTGTATCCTCTAACAGGACTCCATTTTCTCCACAAGAGTCTCAATCATGCCATTCAGATCACCACCAATCACCTGACAACACCTATGGATCCCCGATAAGTGGTATGTCCAGTGTTGACGATGGGAATGATTTGAAGCACAAACTTAGAGAAATAGAGAATTCATTGTTGGGGCCTGAGGATTTTGATATTGTTGACAGTTACGGCAGCTGCATGGAGACTAACCTCCACGGAGCATCTCCATCAGCTAAATATAATTGGGATCTGATTGCTGAAAACATTCCAAAGCTTGACATGAAAGAAGTCCTCTTGCTATGTGCACAAGCTGTCTCTGATGGTGATATTCCAACAGCAAGAGGCTGGATGGACAATGTATTGGTGAAGATGGTATCGGTTGCTGGCGATCCAATCCAGAGGTTAAGTGCTTACTTGTTGGAAGGGCTTAGAGCAAGATTAGAATTGTCTGGAAGCTTGATCTACAAGTCGTTGAAATGTGAACAACCAACGAGCAAAGAGCTAATGACTTACATGCACATGCTGTATCAGATTTGTCCATATTTTAAGTTTGCATACATATCTGCAAATGCTGTTATTTCTGAAGCAATGGCAAATGAATCCAGGATTCATATAATTGATTTCCAAATCGCACAGGGAACACAATGGCAAATGCTTATTGAAGCGCTCGCACGTAGGCCCGGTGGACCACCTTTTATTCGAATAACAGGGGTCGATGATTCACAATCATTTCATGCGCGCGGTGGAGGACTTCAGATTGTAGGAGAACAACTTTCAAACTTTGCCAGGTCTCGTGGAGTTCTGTTTGAGTTCCACAGCGCTGCAATGTCCGGTTGCGAAGTTCAACGTGAAAATCTTAGAGTTAGTCCTGGAGAAGCCCTCGCCGTAAATTTTCCCTTTAGTTTGCACCATATGCCGGATGAAAGTGTAAGCATAGAGAATCATAGAGACAGATTGTTGAGATTGGTTAAGAGTTTGTCGCCAAAGGTTGTTACCCTTGTTGAGCAAGAATCCAACACAAATACTTCTCCTTTCTTTCAAAGGTTTGTGGAGACAATGGATTTTTACACAGCTATGTTTGAATCAATAGATGTTGCTTGCACCAAAGACGATAAGAAGCGGATTAGTGTGGAGCAGAACTGTGTGGCACGGGACATTGTCAACATGATAGCCTGTGAGGGGATTGAGAGGGTGGAGAGGCATGAAGTTTTTGGGAAGTGGAGGTCGAGATTTTCCATGGCAGGATTTAGACAATGCCAATTGAGTTCTTCAGTGATGCATTCTGTCCAAAATATGTTGAAGGACTTCCATCAAAATTATTGGCTTGAACATAGAGATGGTGCTCTCTATCTTGGTTGGATGAAAAGAGCTATGGCCACTTCTTCTGCTTGGATGTGTTAG 1635 0.4343 MQMSQQRPNSSGLGFYHQPAQGIYLQTNLCGDRDGSSSQGTDLSFETYKPQRFTLESYPEITGFIDCDSPSYASVSSNRTPFSPQESQSCHSDHHQSPDNTYGSPISGMSSVDDGNDLKHKLREIENSLLGPEDFDIVDSYGSCMETNLHGASPSAKYNWDLIAENIPKLDMKEVLLLCAQAVSDGDIPTARGWMDNVLVKMVSVAGDPIQRLSAYLLEGLRARLELSGSLIYKSLKCEQPTSKELMTYMHMLYQICPYFKFAYISANAVISEAMANESRIHIIDFQIAQGTQWQMLIEALARRPGGPPFIRITGVDDSQSFHARGGGLQIVGEQLSNFARSRGVLFEFHSAAMSGCEVQRENLRVSPGEALAVNFPFSLHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETMDFYTAMFESIDVACTKDDKKRISVEQNCVARDIVNMIACEGIERVERHEVFGKWRSRFSMAGFRQCQLSSSVMHSVQNMLKDFHQNYWLEHRDGALYLGWMKRAMATSSAWMC* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4990 544 MobiDBLite consensus disorder prediction 75 115 - -
Mtr4g4990 544 Pfam GRAS domain family 173 542 IPR005202 -
Mtr4g4990 544 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 19 543 IPR005202 -
Mtr4g4990 544 MobiDBLite consensus disorder prediction 75 111 - -
Mtr4g4990 544 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 19 543 - -
Mtr4g4990 544 ProSiteProfiles GRAS family profile. 163 543 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4990 Mtr-Chr4 64082059 64084895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4990 1 542 GRAS Transcription Factor Family AT4G17230 57.875 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr4g4990 GRAS 7.7e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4990 - - gmx:100776109 847.04