Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4949 ATGACCAAAATATTGAGTTCTATAGCTTTACCATCCCTCATCACTTTCATTTTGATCTTCTTGATTTCTATTACTTGTTGCTTTCAAGAGGAGCGATCTATATACTTGGTCTTATTGGAAGGAGAAGCGGTTGCATTTCATGGAGCTTCACAAAATGAAGATTCATCAAAGATTCACCTCATCAGAGGAGCCTCGAAGGCACATGAAAAATACTTATTAGCGTCTCATGACATGCTTCTACAAAGCACTTTGGAGAATGGAAGTTATAATAAACTCCACAGTTATAAACACATAATTAATGGCTTCTCTGTTCACACAACCCCTTCCCAGGCAAAAAGACTAAGAGCTACACCAGGAGTGAAGTTAGTAGAGAAAGATAGAGGAGTGAAACTGATGACAACATACACTCCTGATTTTCTTAACTTGCCAAAAGGATTATGGGCACAAGTAGGAGGTGACAAAAATGCAGGTGATGGAATTGTTATTGGTATTGTTGATAGTGGCATTAATCCAATTCATCCAAGCTTTGCTTACCAACCTTTCACTTCAAATATCTCTCACTTTTCTGGTGCTTGTGAGACTGGTCCACATTTCCCACCTGGTTCTTGCAATGGAAAGATTATTTCAGCTAAATATTTCTCTGCTGGTGCTCAAGCTAGTCCTACCTTTGATGCTTCTGTGGATTTTCTTTCACCTTTTGATGCAGGTGGACATGGAAGTCATGTGGCATCTATTGCTGCTGGAAATGCTGGTGTTCCTGTTGTAGTGAATGGTTTTTTCTATGGGCAAGCGAGCGGAATGGCACCGCGTGCAAGGATTGCCGTTTATAAGGCTATCTACCCATCCGGGGGAACTATGGCAGATGCTGTTGCAGCTATTGAACAAGCTGTCCAAGATGGAGTAGATATCATATCACTCTCTATTGGACCAAATGAACCAACAAAAGATACATTGACATTTCTCAACATCTTTGATATTACCTTATTATTTGCAAGAAAAGCAGGGGTTTTAGTGGTGCAAGCTGCAGGGAATAATGGTCCATCATCTTCAACTGTAGTGTCATTTAGTCCATGGAGTGTCGGTGTTGCCGCTTGCAACACAGACAGACATTATTATTCTTCAATTCTTCTTAGAAATGGCACAATAGTTGGTGGTGTTGGACTAACAGGACCAAGTTTTGGGAATGGGAAGGTTTACCATACACTTGTATTAGCTAAGGATGCAGTGAAAATAAATGGAACATTTCCAAGGACTCCAGAGTACTTAGAAGAGTGTCAACATCCAGAAGCTTTGGATCCTAGTAAAGTGTTTGGAAGTATCATTATATGCACCTTCTCAGAAGGATTTCTTAATCAGACCTCAACTCTTGCTGCCATTATCGACACTGCCAAGGCTCTAAAATTCGAGGGTTTTATTTTTACTGCAAATCCGAGCTATGGCGATTATATTGCAGAGCCAATTCCTTTCGGTATTCCCGGTATCTTGATTCCTTCTGTCGCGGATTCCAAGGTTATAATGCAATATTATGAAGAACATACAAAGAGGGACGAGAGAGGAACTGTTACAGAGTTTGGTGCTGCGGCATCTACGGGGGAAGGAAGGGATGCCTCTTTCAAAGGGCGATCACCGGTTGTTAGTAGATTTTCTTCAAGGGGTCCAGATATAATTGATTCAAAAAGAACTCTTGCTGATGTACTTAAACCTGATATTCTTGCTCCAGGGCACCAAATATGGGCCGCATGGAGTCCTATTAGTGCCAAACAACCTATGCTAACAGGACACAATTTTGCATTATTATCCGGTACCAGCATGGCGGCGCCTCATGTGGCTGGAATCGCAGCACTGATCAAGCAACATAATCCATCATGGACTCCATCTATGATAGCATCTGCGATCACCACAACCAGCAGAAAGTATGACAAGCTTGGAGATCCTCTGATGGCCGAAGGCTACGAGGCCAACACCTTGCATCCCTCCACTCCTTTTGAACATGGTGCGGGCATTGTGGACCCTAGCCGTGTCAATAATCCAGGCTTGGTTCTATCTTCAGATTATGAAGACTTCATCAGCTTCCTGTGCTCTTTGCCAAACATTGATACGAAGACAATAACTAGAGCGACGGGAGAGACCTGCAACAGCCCATTTGACTATCCATCTAATTTAAACCTTCCATCAGTGACAATATCTGCACTTAAAGGATCAATTTATTTGAAAAGAACTGTCATGAATGTAGGGAACAGCACAGAGACATACTTATGCGGTGTTCGAGCTCCTAATAGAACTGCAGTTAACCTGTATCCAACTTTTTTTACCATAACTCCACAAGGAACTCAGGATCTGGAAATACAAATCAATGTCACTCAACCAAGTGAAGATTTTAGCTTTGGTGAAATTGTTTTGGCAGGAAGTATGAACCACATAGTAAGAATAACTTTGTCAGTTGTGCCAGTTTCAACACAATGA 2463 0.4166 MTKILSSIALPSLITFILIFLISITCCFQEERSIYLVLLEGEAVAFHGASQNEDSSKIHLIRGASKAHEKYLLASHDMLLQSTLENGSYNKLHSYKHIINGFSVHTTPSQAKRLRATPGVKLVEKDRGVKLMTTYTPDFLNLPKGLWAQVGGDKNAGDGIVIGIVDSGINPIHPSFAYQPFTSNISHFSGACETGPHFPPGSCNGKIISAKYFSAGAQASPTFDASVDFLSPFDAGGHGSHVASIAAGNAGVPVVVNGFFYGQASGMAPRARIAVYKAIYPSGGTMADAVAAIEQAVQDGVDIISLSIGPNEPTKDTLTFLNIFDITLLFARKAGVLVVQAAGNNGPSSSTVVSFSPWSVGVAACNTDRHYYSSILLRNGTIVGGVGLTGPSFGNGKVYHTLVLAKDAVKINGTFPRTPEYLEECQHPEALDPSKVFGSIIICTFSEGFLNQTSTLAAIIDTAKALKFEGFIFTANPSYGDYIAEPIPFGIPGILIPSVADSKVIMQYYEEHTKRDERGTVTEFGAAASTGEGRDASFKGRSPVVSRFSSRGPDIIDSKRTLADVLKPDILAPGHQIWAAWSPISAKQPMLTGHNFALLSGTSMAAPHVAGIAALIKQHNPSWTPSMIASAITTTSRKYDKLGDPLMAEGYEANTLHPSTPFEHGAGIVDPSRVNNPGLVLSSDYEDFISFLCSLPNIDTKTITRATGETCNSPFDYPSNLNLPSVTISALKGSIYLKRTVMNVGNSTETYLCGVRAPNRTAVNLYPTFFTITPQGTQDLEIQINVTQPSEDFSFGEIVLAGSMNHIVRITLSVVPVSTQ* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4949 820 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 162 173 IPR023827 -
Mtr4g4949 820 Pfam Fibronectin type-III domain 720 814 IPR041469 -
Mtr4g4949 820 ProSitePatterns Serine proteases, subtilase family, histidine active site. 238 248 IPR022398 -
Mtr4g4949 820 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 132 IPR037045 -
Mtr4g4949 820 Gene3D - 692 816 - -
Mtr4g4949 820 SUPERFAMILY Protease propeptides/inhibitors 84 131 - -
Mtr4g4949 820 ProSitePatterns Serine proteases, subtilase family, serine active site. 601 611 IPR023828 -
Mtr4g4949 820 PRINTS Subtilisin serine protease family (S8) signature 157 176 IPR015500 -
Mtr4g4949 820 PRINTS Subtilisin serine protease family (S8) signature 234 247 IPR015500 -
Mtr4g4949 820 PRINTS Subtilisin serine protease family (S8) signature 600 616 IPR015500 -
Mtr4g4949 820 CDD Peptidases_S8_3 129 636 IPR034197 -
Mtr4g4949 820 Gene3D - 368 538 - -
Mtr4g4949 820 CDD PA_subtilisin_like 374 509 - -
Mtr4g4949 820 Gene3D Peptidase S8/S53 domain 159 688 IPR036852 GO:0004252|GO:0006508
Mtr4g4949 820 Pfam Subtilase family 157 639 IPR000209 GO:0006508|GO:0008236
Mtr4g4949 820 Pfam Peptidase inhibitor I9 64 132 IPR010259 -
Mtr4g4949 820 ProSiteProfiles Serine proteases, subtilase domain profile. 134 675 - -
Mtr4g4949 820 SUPERFAMILY Subtilisin-like 131 679 IPR036852 GO:0004252|GO:0006508
Mtr4g4949 820 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 61 810 IPR045051 -
Mtr4g4949 820 PANTHER SUBTILISIN-LIKE PROTEASE SBT2.6 61 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4949 Mtr-Chr4 63629646 63635071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4949 3 814 Subtilisin-like Serine Gene Family AT1G62340 59.184 0.0 972