Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4943 ATGGAAATATCTCTTCCTTTGATTCTTCTTTCCACTGTGGTTATTATGGCTATGCCACTTTCATTTGGTGTAAAAGGAAACCAACTTTCTTACAACTACTACAAGAATTCTTGTCCAAACTTGGAAAGTTTGGTCGAGAGAGAATTGATGAGCGTATTCATGACAGATATTCGTGCACCATCAGCATTTCTAAGGCTCATGTTTCATGATTGCCAAGTTCAGGGATGTGATGCCTCGATTTTGTTGGACACAATCTACGCTACTCAAAGCTCTGAAATAGCTTCTTCAGGAAACTTTGCAATCAGAAATAGGGAAACAATCAACGACATAAAATCGGTATTAGAAGAAGAATGTCCGGGGCAAGTGTCTTGTGCAGATATCATTGTATTAGCTGCTAAGGTATCAGTGTCACTCTCTGGAGGACCAAGTATTCAGGTTCCATTTGGAAGAAAAGATTCAAGAACTTCTAGTTCTAAAGAGGCTGATGCTAAGCTTCCTTCACCGACAGTAACAGTTGATGAATTTTTATCCATTTTCAAATCTAAAGGAATGAACATTCAAGAATCTGTTGCCATTTTAGGTGCACATACATTAGGTGTTGGACACTGCTTAAGCATTGTTGGCAGATTGTATAATCAAAATCAACAGATAGGAAACAATATGAATTTGGGTTATGAAACCTCACTAAGACTAGCATGCCCAACTGTTATTCCTATGACAAACCTAACATTTGTGCCTAATGACATGACCCCAACAATATTTGACAATCAATATTACCGAGACATTATGATGGGAAGAGGTTTGCTTGGTATTGACTCGAGCATTTCTAGAGATCCACGAACTGCACCCATTGTCATGAGGTTTGCTATGGATCAGAGCTACTTCTTTGAGAACTTCTCATCTGCATTTGTTAAGCTTTCTGCTAGCAATGTTCTCACAAATATTCAAGGTGAAGTCAGAAGGAAATGCAACCAGCTAAACTAG 984 0.3852 MEISLPLILLSTVVIMAMPLSFGVKGNQLSYNYYKNSCPNLESLVERELMSVFMTDIRAPSAFLRLMFHDCQVQGCDASILLDTIYATQSSEIASSGNFAIRNRETINDIKSVLEEECPGQVSCADIIVLAAKVSVSLSGGPSIQVPFGRKDSRTSSSKEADAKLPSPTVTVDEFLSIFKSKGMNIQESVAILGAHTLGVGHCLSIVGRLYNQNQQIGNNMNLGYETSLRLACPTVIPMTNLTFVPNDMTPTIFDNQYYRDIMMGRGLLGIDSSISRDPRTAPIVMRFAMDQSYFFENFSSAFVKLSASNVLTNIQGEVRRKCNQLN* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4943 327 Pfam Peroxidase 48 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g4943 327 PANTHER PEROXIDASE 22 325 - -
Mtr4g4943 327 SUPERFAMILY Heme-dependent peroxidases 28 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr4g4943 327 Gene3D - 32 327 - -
Mtr4g4943 327 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g4943 327 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g4943 327 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g4943 327 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g4943 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g4943 327 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g4943 327 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g4943 327 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g4943 327 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g4943 327 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g4943 327 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g4943 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g4943 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g4943 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g4943 327 Gene3D Peroxidase, domain 2 166 306 - -
Mtr4g4943 327 PANTHER PEROXIDASE 25-RELATED 22 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g4943 327 CDD secretory_peroxidase 28 324 IPR033905 GO:0004601|GO:0042744
Mtr4g4943 327 ProSiteProfiles Plant heme peroxidase family profile. 28 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4943 Mtr-Chr4 63560472 63562212 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4943 75 327 Peroxidase AT3G17070 52.529 1.78e-87 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4943 K00430 - gmx:100806951 497.664