LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr4g4930	ATGGCTGAGATTGATTTGGAATGGCCAAAGAAAGACAACCGTCGTTTGCTTCATGTTGTTTATCGTGTTGGTGACCTTGAACGCACCATTAAGTTTTATACTGAGGCTCTTGGGATGAAACTTTTGAGGCAGAGAGATGTTCCTGAGGAGAAATATGCCAATGCTTTTCTTGGATTTGGCGATGAACAATCCCATTTTGTTGTTGAATTAACATATAATTATGGGGTGACTTCGTATGATGTTGGAGATGGCTTTGGACATTTTGCAATTGCAACTCAAGATGTTTACAAATTGGTTGAGCACATTCGTGCTAAAGGTGGAAACATCACAAGGGAGGCTGGTCCAGTTCAAGGTGGGACAACTGTTATTGCCTTTGTGAAGGATCCTGATGGCTACACTTTTGCACTTGTTCAAAGACCTATAGTTCACGACCCATTCTGTCAAATAAGTCTCCGCGTTGGTGATTTAGAACGTGCCATAAAGTTTTATGAAAAGGCTTTGGGCTTGAAGGTGGTGAGGAAGGTTGATAATCCTGAGAACAAGTACACTATTGCTATACTTGGGTATAAAGAGGAGGACGACGCAACTGTGTTGGAGTTGACATATAATTATGGTGTCACCGAATACTCTAAGGGAACTGCTTATGCACAGATTGCTGTTGGTACTGATGATGTCTACAAGAGTGCTGATGTAGTCAACCTAGTAACGCAAGAGCTTGGAGGGAAGATCACTCGGCAACCAGGGCCAATTCCCGGCCTTAACACAAAAGTCGTTTCTTTTTTAGATCCAGATGGATGGAAAACTGTGTTAGTTGACAATGAAGATTTCCTGAAGGAACTGGAGTGA	846	0.422	MAEIDLEWPKKDNRRLLHVVYRVGDLERTIKFYTEALGMKLLRQRDVPEEKYANAFLGFGDEQSHFVVELTYNYGVTSYDVGDGFGHFAIATQDVYKLVEHIRAKGGNITREAGPVQGGTTVIAFVKDPDGYTFALVQRPIVHDPFCQISLRVGDLERAIKFYEKALGLKVVRKVDNPENKYTIAILGYKEEDDATVLELTYNYGVTEYSKGTAYAQIAVGTDDVYKSADVVNLVTQELGGKITRQPGPIPGLNTKVVSFLDPDGWKTVLVDNEDFLKELE*	282

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr4g4930	281	ProSitePatterns	Glyoxalase I signature 1.	148	169	IPR018146	GO:0004462\|GO:0046872
	Mtr4g4930	281	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	15	139	IPR037523	-
	Mtr4g4930	281	PANTHER	LACTOYLGLUTATHIONE LYASE	1	281	-	-
	Mtr4g4930	281	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	149	267	IPR004360	-
	Mtr4g4930	281	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	16	135	IPR004360	-
	Mtr4g4930	281	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	14	140	IPR029068	-
	Mtr4g4930	281	CDD	GlxI_Ni	16	137	-	-
	Mtr4g4930	281	PANTHER	LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN	1	281	-	-
	Mtr4g4930	281	ProSitePatterns	Glyoxalase I signature 1.	18	39	IPR018146	GO:0004462\|GO:0046872
	Mtr4g4930	281	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	145	273	IPR037523	-
	Mtr4g4930	281	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	146	272	IPR029068	-
	Mtr4g4930	281	TIGRFAM	glyox_I: lactoylglutathione lyase	148	276	IPR004361	GO:0004462\|GO:0046872
	Mtr4g4930	281	TIGRFAM	glyox_I: lactoylglutathione lyase	6	147	IPR004361	GO:0004462\|GO:0046872
	Mtr4g4930	281	Gene3D	-	142	281	IPR029068	-
	Mtr4g4930	281	Gene3D	-	1	139	IPR029068	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr4g4930	Mtr-Chr4	63446037	63448859	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr4g4930	148	272	Calmodulin-binding Proteins	AT1G08110	24.000	4.90e-08	50.8

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr4g4930	4	63446037	63448859	Mtr4g4930	4	63446037	63448859	ECH
	Mtr2g0818	2	8328938	8335089	Mtr4g4930	4	63446037	63448859	ECH