Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4921 ATGGGTTGTTACACTAGCAAGCCAGAGGTGGACAAGTTTGCTCCCCATCGTGGATATGCCGCCATCACTGCCGATGATGATACTACTTATCGGTACGTTACTGTTTCAGCATATTCCAATCAGATTCAGATCACTACAACACCTCCAAAACTGGACTCACTTGCTTCACCAGTGACAGCACCACCAAATCCAAAACCCTCTCCCACAGCCCAAAATGTGAAAACTGTCCAGAAAACTCAAAAAACCATATTAGAAAAACCCTACGAAGATATAAAGAAGTTGTACACTTTTGGTAAAGAATTGAGTAGAGGGAAATTTGGGATTACTTATTTCTGCACTGAGAATTCCACTGGCCAAAATTATGCATGTAGGTCTATATTAAAGAGGAAGCTTGTGTCGAAAGCGGATAAAGAAGATATTAAAAGAGAGATTCAGATTCTGCAGCATTTTTCTGGTCAACCAAATATTGTGAAATTCAAAGGTGCTTATGAGGATAGCTTATCTATTCACCTTGTGCTAGAACATTGTGCTTACGGGGAACTATTTGATACAATCAATGCTCATCCTCACGGTTATTCAGAGAGAGTTGTTGCATCCTTATGCAGGTGTATTGTTAATGTTGTGCACACTTGTCATTGCATGGGTGTTATGCACCGCGACTTAAATCCGGAGAATTTCTTGTTCTCTACTAAGGATAAAGCTCTAACACTCAAGGCTGTTGATTTTAGATTCTCTGTCTTCATTGAAGAAGGAAAGATTTATAATGATATGGTAGGCAGTGGTTGCTACGTTGCTCCTGAGGTACTGCTTCGCAGTTATGGAAAAGAAATAGACATTTGGAGTGCAGGCATCATATTGTATATTCTACTTAGTGGTGGACCGCCTTTTTCACCTGGAACTGATAAGGGACTATTGAATGCCGTATTGGAGGGTGAACTTGACTTATTGAGTGAGCCATGGCCATCAATATCAGACAGTGCTAAAGATCTAGTCAAGAAGATGCTAACACCAGATCCAAAAAAGAGAATTACTTCTAAACAAGTCCTTGAACACACGTGGATGAGAGACGGTGGGGAGGCCTCTGATAAACCGATTGATATTTCAGTTCTATCTAGAATGAAACAGTTCAGGGCAATAAATACGTTCACGAAACTTGGGTTGAAGGTTATGGCTGAAAATCTAGCGGAAGAGGTTAAAGGTCTCAAGGAAACGTTTGAAAATATGGATACTGATAGTAGTGGCACCATCACCTATGAAGAATTGAAGACAGGATTGGCTCAAATTGGACTTATGAAAGCCGTAAGTAGTTATAAATCCATAACAAAAGCATGACTAGTTGAATGCATGACTCTTATCATAAACTTAACAAATTGTGTTATCATGTATAATGTTTCTCAGGCTGACGTTGATGGAAAAGGGTCGATTGACTATCTTGAATTCATATCGGCTACAATGCATAGGTACAGGCTTGAGCGAGATGAAAATATTCACAAGGCATTTCAGTATTTTGATAAAGACAGTAGTGGGCATATTACTAGAGAGGAATTGGAGACTGCCTTGACAAAGCATGGAATAAGTGACGAAGCAAAAATAAAGGAAATAGTTACTGAGGTGTATACAGATAATGATGGGAAAATAAACTATGATGAATTCTGTGCAATGATGAGAAGTGGAATGCCACATCAGGGACCGCTATTTTAA 1701 0.3933 MGCYTSKPEVDKFAPHRGYAAITADDDTTYRYVTVSAYSNQIQITTTPPKLDSLASPVTAPPNPKPSPTAQNVKTVQKTQKTILEKPYEDIKKLYTFGKELSRGKFGITYFCTENSTGQNYACRSILKRKLVSKADKEDIKREIQILQHFSGQPNIVKFKGAYEDSLSIHLVLEHCAYGELFDTINAHPHGYSERVVASLCRCIVNVVHTCHCMGVMHRDLNPENFLFSTKDKALTLKAVDFRFSVFIEEGKIYNDMVGSGCYVAPEVLLRSYGKEIDIWSAGIILYILLSGGPPFSPGTDKGLLNAVLEGELDLLSEPWPSISDSAKDLVKKMLTPDPKKRITSKQVLEHTWMRDGGEASDKPIDISVLSRMKQFRAINTFTKLGLKVMAENLAEEVKGLKETFENMDTDSSGTITYEELKTGLAQIGLMKAVSSYKSITKA*LVECMTLIINLTNCVIMYNVSQADVDGKGSIDYLEFISATMHRYRLERDENIHKAFQYFDKDSSGHITREELETALTKHGISDEAKIKEIVTEVYTDNDGKINYDEFCAMMRSGMPHQGPLF* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4921 565 CDD STKc_CAMK 95 353 - -
Mtr4g4921 565 Gene3D - 380 554 - -
Mtr4g4921 565 ProSiteProfiles Protein kinase domain profile. 95 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4921 565 Pfam EF-hand domain pair 493 555 IPR002048 GO:0005509
Mtr4g4921 565 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 53 559 - -
Mtr4g4921 565 ProSiteProfiles EF-hand calcium-binding domain profile. 539 560 IPR002048 GO:0005509
Mtr4g4921 565 SMART efh_1 400 428 IPR002048 GO:0005509
Mtr4g4921 565 SMART efh_1 529 557 IPR002048 GO:0005509
Mtr4g4921 565 SMART efh_1 494 522 IPR002048 GO:0005509
Mtr4g4921 565 ProSitePatterns EF-hand calcium-binding domain. 503 515 IPR018247 -
Mtr4g4921 565 SUPERFAMILY Protein kinase-like (PK-like) 76 380 IPR011009 -
Mtr4g4921 565 Gene3D - 370 484 - -
Mtr4g4921 565 Pfam EF hand 401 423 IPR002048 GO:0005509
Mtr4g4921 565 ProSiteProfiles EF-hand calcium-binding domain profile. 396 431 IPR002048 GO:0005509
Mtr4g4921 565 Coils Coil 391 411 - -
Mtr4g4921 565 SUPERFAMILY EF-hand 396 554 IPR011992 -
Mtr4g4921 565 PANTHER SERINE/THREONINE-PROTEIN KINASE 53 559 - -
Mtr4g4921 565 ProSitePatterns EF-hand calcium-binding domain. 409 421 IPR018247 -
Mtr4g4921 565 MobiDBLite consensus disorder prediction 48 71 - -
Mtr4g4921 565 Pfam Protein kinase domain 95 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4921 565 CDD EFh 495 555 IPR002048 GO:0005509
Mtr4g4921 565 ProSiteProfiles EF-hand calcium-binding domain profile. 490 525 IPR002048 GO:0005509
Mtr4g4921 565 Gene3D Phosphorylase Kinase; domain 1 97 180 - -
Mtr4g4921 565 Gene3D Transferase(Phosphotransferase) domain 1 181 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4921 Mtr-Chr4 63328056 63330997 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4921 1 565 EF-hand Containing Proteins AT4G04720 57.766 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mtr4g4921 Pkinase 1.2e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4921 K13412 - gmx:100816859 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4921 4 63328056 63330997 Mtr4g4921 4 63328056 63330997 ECH