Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr4g4915 | ATGGAAGAAGGTAACAACAACAACGAGCTTCCATGTCCATCACCTTCACCTTTTCGCTCTTCTTCACTTTTCAAAGACATTTCTAACTTCAAAACCCCCAAACGCGCTTCTTCTTCTTCTTCTTTTCTCTCTCAACAACATACTCCTCAAACTCAATTTTTCACCGCTTCCAAATCCAAACACACCACAACACTCCCGAGGAGGCCGAGACTCAAAGAAAATCATACCATTTCAACTGCTTCAAAGAAACTCAAAGCTTTTCAACTCGAACAATCTCACTCCTCCAGAATCGAACAAATCAAACAACAACAATCGCTTAAATCGTTAGCCAAATCACTCACTGTTTGGCTTAATTTCCTTCTCGAATCACCTGCTTCTTGCGGTTGCGATGTTTCAATCGCCGGTGGAAGTCAGATCGCAGATGCTTCTCCGGTGACGAGTAAGGGGAAACGTGATAATGTTCCGGGAAATTCATTTGGAGTTGATTCTACTTGGAGAACTCCGAAACGACAGAGGAAGACGACGATGACAACTTCTTCGTCGCGTTTTGGTAAGGAGAATGTGTCTGCTGTGGATATGCAGAATTCATCGTTTTCGCGTTTGAAGGATTCTTTGAAGGATGTATGTAGCTTCGATGATTTTAAGCAGCGGATGAGTGTTTATTTGAGTCTCGGAACTTGTGAAGATATTTTCCATGTCATGAATCAAGTCACTAAGACAATTGATGAAGGAAGGCTAAATATGAAGGCACATTGCCCGATCGTGACGGATTTAGGGTTGAAGGATAAGGCCATAAAAGTCCTTATGTGTTATAATCCAAGTTGGCTGCGAATTGGTTTATATATAATTTTCGGTGGGGACTCTTTAGTGTCAAATGGGGATGGTGATTCTGACAAAGATGTTACATTTTTAAAAATGGTCATTGATAAACTGTTTTTTACACACGAAGGTTTCGCAAAATCATATGCATATAACAAGATGGTTGAAGGAGTTTATAGGTCTGGTTACTATGAAAATTTGGGGAATGTGATTTTGAAGAGAATACTGTTGCTTGTGCTTATACTTGATAAAGCTAAGTGTCAAAGTTGCCTCCCGATTGAGTATGGTATTGACGGACTGGACAGTGGTTCCCCTTTATTATTCAAAGCAGAATCTTGGGTTAAAGCAAGTAGTCAAGTGATCCAGGAATTTCTGTCATCTGATGTAATGCGCGGAGAAGGCAATCTTCTAACACATCTGGTTATTTTAGGTTACAAACTAACTCACCAACAGGGACCTCTTGTTGAGTATGATTTCCGAGTCAAGGATTTATTTATAGATCTCCAAGATGGGCTAAAATTGTGTAGAGCTATTCATCTCTTGCAAAATGATTCTTCTATACTCAAGAAAATTGCAGTTCCTTCTGACACCCGTAAGAAAAATATGGTAAACAGTGGTGTTGCCCTACAATATCTTAGACTAGCCGGGGTCTCACTACTTGATGAAGACGGCACAATGATTGTAGCAGATGATATTGTTAATGGAGACAGAGAACTCACAATTTCTTTACTCTGGAATATGTTCATTCACTTGCAGCTACCTTTGTTGGTTGATAAAACAAGTTTAGTTGGGGAAATTTCAAAAATTCGCGGACTTGGCACGGAACTCATGACCGGTGCAAATTCTAGTTCTCTGGAATTGCTTTTGAAATGGATTCAGGCTGTTTGTGACCATTATAACTGCCCAGTTGACAATTTTCACTCCCTTGTTGATGGCAAAGCAATCTGGTGCTTACTTGATCATTACTTCCAGAAGGAACTTCACAATGTTTGTTCGTTGAAGGAATTTTATGAAAAAAGTGGCAAGACATCAATTATGTCAGTGAATGAGTATTCAGATGCACTGTACAATTTCATATTGTCCCAGAAATTGACCACATTACTGGGGAATTTTCCTGAGGTACTTCAGATTAGTGAGCTACTTCAATATAATGGTGCTTGCAGCGATCGAAGTGTGGTGATATTGGTTGTTTTCCTGGCAAGCCAGTTATTTGTCAAGGAAAAAGTGGACAACTTAAATTTTCATAAGCTATTAGGTTATGACTGCCAAAACACAAATCGCAGGAACTTGAGGACTGTACAGTGCCATTCCCGTTCTGAATCAGCACAAAAACCTTATGATTCAGATGTGGGTGACAATGAAGATACGGCAAGAAAATTCAAGGCCATTCAGACTTGGTGGCAAGATATGGCTGATCGAAACTGTATTATGCAGCCAACTATCTCTATTTTGCAGACATCTATGACCACAGAATGCAACACTTCTGTTAGAAGAGAAAATGCTGCAAGAACAATACAATCACGTATCCGAGGACTGGTTGTACACCGCAAGTTTCACAAGATGGTAAATAGTGTTACCCTTTTGCAGACCGTTTTCAGAGCTTGGCTGAAAGTGAGGCAGGAGTCGGTCTGCATTATATTCACTACCGGTCCAATCTATGATTTCTCATGTGAAATATTGAAGAAATCCGAAGTATACGAGAAGTATGTCATGCTTTTCTACCAAAGGCATTCTTTTTTGAGGTTGAAAAGATCAGCGCAGCTTATCCAGCAAGCAGTGAGGAGTTGGTTCTATTGGAGGGCTCGACAAGGATGTAGAAGTCCTGACCTCTTGACTGCAGACACTGTGAATGCTGCCACTTCTATTCAGAAATTCCTTCGTGGTTGGATGGCACGATCTAGATATATTTATCTGCTAGATCAAAAAGAGAAAACTCTACATTTAGCCGAACAGAAACTTATCTTTGATCTTAAAACAAAGGCAGCCATTGGCATTCAGGTTGCTTGGAAAAACTACATACGTTGCAAGTCTACTAGGAAGGAGCACTTGTTTGCAACTAAAATTCAATGTAATTTCCGTAGGTGGTTATTGAGAAAACGATTTATAAATCAGATTCAAGCTGTCATAAAGATTCAATCATATTTTCGAATGTGGAGATGTGTGATTGCTATTCAGAACTTCAAAACCATGTCTAAGGCTGCTATTGTCATTCAATCTTTTTTCCGTGGATGGATTGCTCGGAAGAATGCTTGTGCTCGTAAGAATCAAATTGTTGAGATTCAAAGGCATTGCCGTGGTTGGCTTGTGAAACGGAATTTCTTGTTTCAAAGAGATGCTATAGTAAAGATCCAGAGTGTCAGTCGAAGTTTGAAATGCCAGAAGACACTCAATTGTCAGAAAGATGCTGCACTGGAGATCCAGCGCTTCATCAGGGGACATTTAACCCGAAATCGGCTATTAGGTAGTGCTTTAAGGTTACTTTCAGCTGATACTGGTAGTTGCATTTCAAGACCAGCTGGCTTATGTAGTTTTCAACTTGAAGCATTCATGTTCGCAGTAGTGAAATTGCAACGGTGGTGGAGGGGTCTCTTGTTGCTTAAATTAATGACTAGATCGGCCATCATAATTCAATCTTGTACTCGTGGGTGGATAGCCAGACGGAAGGCCATAGTTGAGACACAGAATATTAATGTCATGGAAGTTCGTAACTGCCAGGAGTATGCCGCATTGGAGCTCCAGCGCTATATTAGGGGGCATTTAACTCGAAATTTGATATTAGGCAGTGCTTCTAAGCTACGTGCAGTTGCTGCTGGATGCATTTCAAAACGAACTGGCTTTTGTAGTTTTCAGTTGGAACTATTCTTGTTTCAAGTAGTGAAATTGCAACGATGGTGGAAGCATCTCTTGTTACATAAATTGATGACAAAGTCTGCAATCATTATACAGTCCCACATTCGTGGGTGGGCAGCTAGGCGAAAGGCGGTTGTTTATAGGCATCATATCGTTGTCATACAGTCCCACTGGAAAGGTTACGTTGCACGTCAGCAGTCAACAAAACAATTAATGGATTTGCGCTCAAGACTTCAAGAGTCTTCCAAAAATGTAGATGACAGCAAGCGTCTCATTAACAGACTCCTGGCAGCGCTTTCAGAGCTGCTTAGTATGAAGAGTCTTAGTGACATTCTTCATACTTGTTCAACGTTGGATTTGGCAACATGGCATTCTCAGAGATGTTGTGAAGAACTTGTGGCTGCTGGGGCCATTGACACCTTGCTGCGGCTTATTCGATTAATCAGCAGGAGTATCCCTGATCAAGAGGTTTTAAAGCATGTTTTGTCAACTCTCCGAAATCTTGCTCGCTATCCTCATCTGCTAGAAGTGCTGATACAAAGACAGGGTTCTATACAGACAATCGTCTTGGAGTTACTGAGGAATAAGGAGGAGGGCTTCTTCATTGCTTCTGAGCTTTTGAAGAAGATATGCTCAACTCAAAAAGGCGTTGAGACCATACTCAAATCTCCTGCCTTTCTAAAGAGACTGCACAGTCTTGTTGAGGAGCTTACTAGGAAGGCCACTTACCAGAAAAGAAATGTTCGGGGTCCTACTCCTAGTTCAATTGTTATTGTTAGAGAAAACACAGATAGAAGATTGAAGGAGGTTACTGAGATTCTGAAGCTACTAGCACACCCTTGA | 4512 | 0.4078 | MEEGNNNNELPCPSPSPFRSSSLFKDISNFKTPKRASSSSSFLSQQHTPQTQFFTASKSKHTTTLPRRPRLKENHTISTASKKLKAFQLEQSHSSRIEQIKQQQSLKSLAKSLTVWLNFLLESPASCGCDVSIAGGSQIADASPVTSKGKRDNVPGNSFGVDSTWRTPKRQRKTTMTTSSSRFGKENVSAVDMQNSSFSRLKDSLKDVCSFDDFKQRMSVYLSLGTCEDIFHVMNQVTKTIDEGRLNMKAHCPIVTDLGLKDKAIKVLMCYNPSWLRIGLYIIFGGDSLVSNGDGDSDKDVTFLKMVIDKLFFTHEGFAKSYAYNKMVEGVYRSGYYENLGNVILKRILLLVLILDKAKCQSCLPIEYGIDGLDSGSPLLFKAESWVKASSQVIQEFLSSDVMRGEGNLLTHLVILGYKLTHQQGPLVEYDFRVKDLFIDLQDGLKLCRAIHLLQNDSSILKKIAVPSDTRKKNMVNSGVALQYLRLAGVSLLDEDGTMIVADDIVNGDRELTISLLWNMFIHLQLPLLVDKTSLVGEISKIRGLGTELMTGANSSSLELLLKWIQAVCDHYNCPVDNFHSLVDGKAIWCLLDHYFQKELHNVCSLKEFYEKSGKTSIMSVNEYSDALYNFILSQKLTTLLGNFPEVLQISELLQYNGACSDRSVVILVVFLASQLFVKEKVDNLNFHKLLGYDCQNTNRRNLRTVQCHSRSESAQKPYDSDVGDNEDTARKFKAIQTWWQDMADRNCIMQPTISILQTSMTTECNTSVRRENAARTIQSRIRGLVVHRKFHKMVNSVTLLQTVFRAWLKVRQESVCIIFTTGPIYDFSCEILKKSEVYEKYVMLFYQRHSFLRLKRSAQLIQQAVRSWFYWRARQGCRSPDLLTADTVNAATSIQKFLRGWMARSRYIYLLDQKEKTLHLAEQKLIFDLKTKAAIGIQVAWKNYIRCKSTRKEHLFATKIQCNFRRWLLRKRFINQIQAVIKIQSYFRMWRCVIAIQNFKTMSKAAIVIQSFFRGWIARKNACARKNQIVEIQRHCRGWLVKRNFLFQRDAIVKIQSVSRSLKCQKTLNCQKDAALEIQRFIRGHLTRNRLLGSALRLLSADTGSCISRPAGLCSFQLEAFMFAVVKLQRWWRGLLLLKLMTRSAIIIQSCTRGWIARRKAIVETQNINVMEVRNCQEYAALELQRYIRGHLTRNLILGSASKLRAVAAGCISKRTGFCSFQLELFLFQVVKLQRWWKHLLLHKLMTKSAIIIQSHIRGWAARRKAVVYRHHIVVIQSHWKGYVARQQSTKQLMDLRSRLQESSKNVDDSKRLINRLLAALSELLSMKSLSDILHTCSTLDLATWHSQRCCEELVAAGAIDTLLRLIRLISRSIPDQEVLKHVLSTLRNLARYPHLLEVLIQRQGSIQTIVLELLRNKEEGFFIASELLKKICSTQKGVETILKSPAFLKRLHSLVEELTRKATYQKRNVRGPTPSSIVIVRENTDRRLKEVTEILKLLAHP* | 1504 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr4g4915 | 1503 | Coils | Coil | 1287 | 1314 | - | - | |
| Mtr4g4915 | 1503 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
| Mtr4g4915 | 1503 | Pfam | Calponin homology (CH) domain | 433 | 523 | IPR001715 | GO:0005515 | |
| Mtr4g4915 | 1503 | SUPERFAMILY | Calponin-homology domain, CH-domain | 350 | 597 | IPR036872 | - | |
| Mtr4g4915 | 1503 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 926 | 1023 | IPR027417 | - | |
| Mtr4g4915 | 1503 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1234 | 1294 | IPR027417 | - | |
| Mtr4g4915 | 1503 | Gene3D | - | 770 | 816 | - | - | |
| Mtr4g4915 | 1503 | Gene3D | - | 1003 | 1049 | - | - | |
| Mtr4g4915 | 1503 | Gene3D | - | 953 | 1002 | - | - | |
| Mtr4g4915 | 1503 | Gene3D | - | 1140 | 1210 | - | - | |
| Mtr4g4915 | 1503 | Gene3D | - | 1244 | 1291 | - | - | |
| Mtr4g4915 | 1503 | Gene3D | - | 1050 | 1099 | - | - | |
| Mtr4g4915 | 1503 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 1362 | 1406 | IPR000225 | GO:0005515 | |
| Mtr4g4915 | 1503 | Gene3D | - | 420 | 525 | IPR036872 | - | |
| Mtr4g4915 | 1503 | SMART | arm_5 | 1348 | 1393 | IPR000225 | GO:0005515 | |
| Mtr4g4915 | 1503 | ProSiteProfiles | IQ motif profile. | 1178 | 1207 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | Pfam | Armadillo/beta-catenin-like repeat | 1349 | 1393 | IPR000225 | GO:0005515 | |
| Mtr4g4915 | 1503 | ProSiteProfiles | IQ motif profile. | 1247 | 1274 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | PANTHER | UNCHARACTERIZED | 1175 | 1501 | - | - | |
| Mtr4g4915 | 1503 | PANTHER | UNCHARACTERIZED | 1 | 1171 | - | - | |
| Mtr4g4915 | 1503 | ProSiteProfiles | IQ motif profile. | 890 | 917 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | ProSiteProfiles | IQ motif profile. | 954 | 983 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | Gene3D | - | 1292 | 1466 | IPR011989 | - | |
| Mtr4g4915 | 1503 | ProSiteProfiles | IQ motif profile. | 1270 | 1299 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | ProSiteProfiles | IQ motif profile. | 771 | 799 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | MobiDBLite | consensus disorder prediction | 140 | 183 | - | - | |
| Mtr4g4915 | 1503 | ProSiteProfiles | Calponin homology (CH) domain profile. | 403 | 525 | IPR001715 | GO:0005515 | |
| Mtr4g4915 | 1503 | SUPERFAMILY | ARM repeat | 1306 | 1458 | IPR016024 | - | |
| Mtr4g4915 | 1503 | Gene3D | - | 887 | 952 | - | - | |
| Mtr4g4915 | 1503 | ProSiteProfiles | IQ motif profile. | 1072 | 1101 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | ProSiteProfiles | IQ motif profile. | 1026 | 1055 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | ProSiteProfiles | IQ motif profile. | 1142 | 1170 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | SMART | iq_5 | 1269 | 1291 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | SMART | iq_5 | 793 | 816 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | SMART | iq_5 | 1071 | 1093 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | SMART | iq_5 | 887 | 909 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | SMART | iq_5 | 1025 | 1047 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | SMART | iq_5 | 953 | 975 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | SMART | iq_5 | 1177 | 1199 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | SMART | iq_5 | 1141 | 1163 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | SMART | iq_5 | 1002 | 1024 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | SMART | iq_5 | 976 | 998 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | SMART | iq_5 | 1246 | 1268 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | SMART | iq_5 | 770 | 792 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | Pfam | IQ calmodulin-binding motif | 1274 | 1289 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | Pfam | IQ calmodulin-binding motif | 979 | 993 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | Pfam | IQ calmodulin-binding motif | 1248 | 1266 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | Pfam | IQ calmodulin-binding motif | 1074 | 1092 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | Pfam | IQ calmodulin-binding motif | 1005 | 1022 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | Pfam | IQ calmodulin-binding motif | 1125 | 1137 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | Pfam | IQ calmodulin-binding motif | 1181 | 1196 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | Pfam | IQ calmodulin-binding motif | 958 | 974 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | Pfam | IQ calmodulin-binding motif | 890 | 908 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | Pfam | IQ calmodulin-binding motif | 773 | 792 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | Pfam | IQ calmodulin-binding motif | 1030 | 1046 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | Pfam | IQ calmodulin-binding motif | 1143 | 1161 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | PANTHER | ABNORMAL SPINDLE MICROTUBULE ASSEMBLY | 1175 | 1501 | - | - | |
| Mtr4g4915 | 1503 | PANTHER | ABNORMAL SPINDLE MICROTUBULE ASSEMBLY | 1 | 1171 | - | - | |
| Mtr4g4915 | 1503 | MobiDBLite | consensus disorder prediction | 1 | 68 | - | - | |
| Mtr4g4915 | 1503 | ProSiteProfiles | IQ motif profile. | 1003 | 1032 | IPR000048 | GO:0005515 | |
| Mtr4g4915 | 1503 | Gene3D | - | 553 | 677 | IPR036872 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr4g4915 | 989 | 1085 | Myosins gene family | AT1G17580 | 31.068 | 6.29e-06 | 49.3 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr4g4915 | K16743 | - | gmx:100817636 | 1592.4 |