Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4911 ATGGCGTCGTTCTGCATTCACCAGGGCTGCAATGGCATCGTCTATGATGAAAGTGAAGATGATTCTAAACATGATCAACTTTTCCTGGGCGTGAAGAAGACTGAAATCAAGGATCCTGGCCATAGAGAGAAGCACGATAAGGTCAAAGTTGATTTGAATGTGAGTGAGAAAAGGGAAGATGATTCTAAACACTATCAACATTCCTTGGGCATGAAGAATTTGAATTTAAAAGATGAGGTTTCAGCAAATGGAAAAGTTGCAAAGACATTTACTTTAGATGAGCTTGCAGCTGCAACAGGGAATTTTAGGGCGGGTTACTTTGTTGGTGAAGGAGGGTTTGGCAAGGTTTATAAGGGTTACATCGAGAAAATTAATCAGGTTGTTGCAATAAAGCAACTTGACCCTACTGGACTTCAAGGAACCAGAGAATTTGTTGTTGAAGTGTTAACACTTGGTTTGGCAGAACACCCAAATCTTGTCAAGTTATTAGGATTTTGTGCTGAGGGAGAGCAGAGGCTTTTGGTTTACGAGTACATGCCTTTGGGATCTTTGGAGAATCATTTGCATGATCTTTCTCCCGGGGAAAAACCACTGGATTGGAATACGAGAATGAAAATAGCTGCTGGTGCAGCTAAAGGTTTGGAGTATTTGCATGATAAAATGAAGCCTCCGGTCATATATCGTGACCTCAAATGCTCCAACATTTTGTTAGGCGATGATTATCATCCCAAGTTATCTGATTTCGGCTTGGCCAAAGTAGGTCCAACGGGTGATAAGACCCATGTCTCAACAAGAGTAATGGGAACATTTGGGTACTGTGCTCCAGATTATGCAATGACAGGTCAATTGACATTCAAGTCGGACATTTATAGCTTTGGAGTGGCTCTTTTGGAACTCATCACAGGCAGAAAGGCCTTTGACCATAGAAGACCTGTTAAAGAACAAAAAGTAGTCGAATGGGCAATTCGGTCATTCAAAAAGCAAAAAAGATTCTCAAAGATGGTGGATCCATTGCTTGAAGGTCAATATCCAGAAAGAGGTCTATACCAAGCTTTTGAAATTGCCTCTAGGTGTGTTCAAGAGCAGCCTAATATGCGGCCTGTTATAGCAGATGTGGTCACAGCTCTAGATTACATTGTTTCCCAAAATTATGATCCACAAGTTCATCCAATACAAAGCTCGAGATAA 1188 0.4116 MASFCIHQGCNGIVYDESEDDSKHDQLFLGVKKTEIKDPGHREKHDKVKVDLNVSEKREDDSKHYQHSLGMKNLNLKDEVSANGKVAKTFTLDELAAATGNFRAGYFVGEGGFGKVYKGYIEKINQVVAIKQLDPTGLQGTREFVVEVLTLGLAEHPNLVKLLGFCAEGEQRLLVYEYMPLGSLENHLHDLSPGEKPLDWNTRMKIAAGAAKGLEYLHDKMKPPVIYRDLKCSNILLGDDYHPKLSDFGLAKVGPTGDKTHVSTRVMGTFGYCAPDYAMTGQLTFKSDIYSFGVALLELITGRKAFDHRRPVKEQKVVEWAIRSFKKQKRFSKMVDPLLEGQYPERGLYQAFEIASRCVQEQPNMRPVIADVVTALDYIVSQNYDPQVHPIQSSR* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4911 395 Gene3D Transferase(Phosphotransferase) domain 1 179 390 - -
Mtr4g4911 395 ProSiteProfiles Protein kinase domain profile. 102 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4911 395 CDD STKc_IRAK 108 377 - -
Mtr4g4911 395 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524
Mtr4g4911 395 Gene3D Phosphorylase Kinase; domain 1 63 178 - -
Mtr4g4911 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Mtr4g4911 395 PANTHER OS07G0668900 PROTEIN 40 394 - -
Mtr4g4911 395 SUPERFAMILY Protein kinase-like (PK-like) 89 387 IPR011009 -
Mtr4g4911 395 SMART serkin_6 102 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4911 395 Pfam Protein kinase domain 107 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4911 395 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 40 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4911 Mtr-Chr4 63238233 63241483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4911 75 379 Glycoside Hydrolase AT3G07070 60.656 1.04e-136 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mtr4g4911 Pkinase 7.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4911 - - mtr:MTR_2g095920 601.282