Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4892 ATGATGGCTGTGGAGGATCGTTTGGTGGGTGAAGATGTTACAGAAGAAGGTTTTCCAGTTGGTATGCGTGTTCTGGCTGTTGATGATGATCAGACTAGTCTCAAAGTGCTGGAGAAGCATCTTCTCACATGCAAGTATAATGTTACTACAACTACGAAGTCAGTGGAAGCGCTTGAATTGTTGAGGGAAAAGAGAAGCATGTTTGATCTTATAATTAGTGATGTAAACATGCCAGAAATGGATGGTTTCAAGCTCCTTGAGCAAGTTGGACTTGAGATGGACCTGCCTTTCATTATGTTGTCAGGACATGATGATAGAGAAAGGGTGATGAAAGGTGTGATGAAAGGCGCTTGCGACTATCTAGTCAAACCGATCCGATTGGAGGAGCTTAAGAACATATGGCAACATGTAGTGAGAAAAAAGATTGAAAGCAAGGATCAAAATCAAGGTATCATTAGTGATGGGGTATCTGGTCAAGACACCTCATCTGAAAATATTCCTAAGAAGAATAAAACGCATGGACGAAAAAGAAAGGAACAAAGTGAGGAGGAAGAAGCAGATACTGATGAAGAGAATGACGAGGAACACTCAACTCGGAAGAAGCCGCGTTTTGTTTGGGATAACGAGTTGCATAAAAAATTTGTTTCTATAGTTAATCTGCTTGGCCTTGACAGTGAGTTTATATGA 687 0.4076 MMAVEDRLVGEDVTEEGFPVGMRVLAVDDDQTSLKVLEKHLLTCKYNVTTTTKSVEALELLREKRSMFDLIISDVNMPEMDGFKLLEQVGLEMDLPFIMLSGHDDRERVMKGVMKGACDYLVKPIRLEELKNIWQHVVRKKIESKDQNQGIISDGVSGQDTSSENIPKKNKTHGRKRKEQSEEEEADTDEENDEEHSTRKKPRFVWDNELHKKFVSIVNLLGLDSEFI* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4892 228 CDD REC_typeB_ARR-like 24 138 - -
Mtr4g4892 228 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 224 - -
Mtr4g4892 228 MobiDBLite consensus disorder prediction 148 165 - -
Mtr4g4892 228 Gene3D - 197 226 - -
Mtr4g4892 228 SMART REC_2 22 134 IPR001789 GO:0000160
Mtr4g4892 228 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 224 IPR045279 GO:0009736
Mtr4g4892 228 ProSiteProfiles Response regulatory domain profile. 23 138 IPR001789 GO:0000160
Mtr4g4892 228 Gene3D - 21 151 - -
Mtr4g4892 228 Pfam Response regulator receiver domain 24 132 IPR001789 GO:0000160
Mtr4g4892 228 SUPERFAMILY CheY-like 21 145 IPR011006 -
Mtr4g4892 228 MobiDBLite consensus disorder prediction 148 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4892 Mtr-Chr4 63071655 63073410 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4892 18 224 Response Regulator Gene Family AT2G25180 57.619 1.61e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr4g4892 Response_reg 1.6e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4892 - K14491 mtr:MTR_4g131580 431.795