Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4891 ATGAATGTTGAAGGGCTTACAAGGGAAAATGTAGCTAGCCATTTGCAGAAATACAGACTTAGTCTCAAACGACCGTCTAAACAGGCTAAAGTAGATGCTGCACTAGATCCTCTCCAGCAAAAGGGTTCAGTACGTGGATATGGAGATTTTTGCACCTTACCTGGATCAAGAAGAATCTTAAGTAGCACACTGCCAACATATGCATCTAGTGGCATGTTTTGTCGGCTGAACGCACCATCTAGTTTGAACTTTAGACGAATGAGTCCTTCTGCACCAGTCCCACCACTTCAGTCTCAAAACATTCTCAGTTTCAAGCAGCCGATGTTTTCTGCAAGTGAAAGCTTGAGTTTTTCCCAGGGTGTTCGAACATCGGCGGAAATTAACCAGTTTCAGCGGAACATTTATCCGCTTGGTAACAAGAATTTAAATCCAATTGATTATACAAGTGCTTTTACAGTTTCTTCTGGCTTCCAAGACATCAGAGATACTGTTAATAATGCAAATAGTTCTCTTTCTTGCATCTCAAGCAATAACCTATCAACACATAATTCAGGAGCATTTGTAAATCACTCTTCTGTTGGAGGGGCTTACGTGGAACCAAAATCTTTTAATCCTGCTACATATGGTTCATCTAACTTTGCTTCCAATCCTTCTCCATTGAGTGAGGATTTTAACAATGATCAAATTTCTGGCAATAGCTTAAATTTTGCCTCTCCCAGTTCTCACTTTAGGAAAAGTCCAGTTGATTTTTCTTCGACACTTGCTGTTCCTTCGGAGGAAGCGATGCAATGTCAAGATGGCTTACTTGGGAATGTTGTAAAGGCTTCATGTTACACGACGCAGCAGCAAAATGTCAGCTCTTCCTTCAACAATACCTTGGACTCTCTTGCTTCTTATAATGAAGACACTAGTTCCATGGTACAAAGTGTACCCCAAACAAATAGTCAATTAATGACTCAGATGCCTCAAGTTGAGAAATTTTATTCAGATGCAAGAGTGACGGAACCACGTGGTGATTGCTTTTTTGAGCAACTGCTAGCTCTAGACGGATTGATTGAGAATAGTTGTGTGTCTTTGGATGACACAATAAGTGAAGCGGTTAAACAGCAGAGTCCATCTGATTAA 1125 0.4053 MNVEGLTRENVASHLQKYRLSLKRPSKQAKVDAALDPLQQKGSVRGYGDFCTLPGSRRILSSTLPTYASSGMFCRLNAPSSLNFRRMSPSAPVPPLQSQNILSFKQPMFSASESLSFSQGVRTSAEINQFQRNIYPLGNKNLNPIDYTSAFTVSSGFQDIRDTVNNANSSLSCISSNNLSTHNSGAFVNHSSVGGAYVEPKSFNPATYGSSNFASNPSPLSEDFNNDQISGNSLNFASPSSHFRKSPVDFSSTLAVPSEEAMQCQDGLLGNVVKASCYTTQQQNVSSSFNNTLDSLASYNEDTSSMVQSVPQTNSQLMTQMPQVEKFYSDARVTEPRGDCFFEQLLALDGLIENSCVSLDDTISEAVKQQSPSD* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4891 374 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 359 - -
Mtr4g4891 374 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 359 IPR045279 GO:0009736
Mtr4g4891 374 Gene3D - 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4891 Mtr-Chr4 63069735 63071508 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4891 1 133 Response Regulator Gene Family AT2G25180 34.028 3.88e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr4g4891 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4891 - K14491 mtr:MTR_4g131580 728.783