Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4877 ATGGATTTGATATCAACTTCATCTGAGAGTGGACAACTGAGTGTTGAAGCTTCATCACTGATTCATGCTGAGAGTGGACAACTGAGTGTTGAAACTTCTTCAATGATTCATGCTGATAGTACTGAATGTTACTCCCCTAGCAATGAAGAATCATGGAAGTCTTTAGTCTTTCAATCTATCAAAGAGGTTGAAGATTTTTATGGTAATTATGCATATAACACTGGATTTTCTATTAGGACTATGTTGAAGTCGAAGATTAATTCACAAAATAAGAAATCAGAAAAGGTACATTATTTGCGTTATGTTTGTAACAAACAAGGTTACAAGAAGGGAAGTTTGCTTAATCCTAACAACAGGCCAACATCAGACAATCCACTGGTTATTGAGTTTGTGAAAGTGAAAGAAAAACCTGAGGAAAGGGTCGGTTGTACAGCTGCAATATATTTGAAGCTGGATGAAGTTTTGAATGTGTATAAGATTTATAGATGGGATATGGCTCACTGTCATCCATTACATAAACCAGAGCATTTGTGTTATCTAAGATCATTTAGAGAAGTAAATGAAGTTCAAGGACAACTAGCTCTAATAAATTCTAAAGCTGGAATGTCGATGAGAACGTCTTATGAAGTTCTTGGTCAAGGAGTTGGAGGTACGGAGAATCTTCCTTTTCGGTTTTCAGACTTAAAGAACTATCTAATGACAATTCGTTAA 711 0.3544 MDLISTSSESGQLSVEASSLIHAESGQLSVETSSMIHADSTECYSPSNEESWKSLVFQSIKEVEDFYGNYAYNTGFSIRTMLKSKINSQNKKSEKVHYLRYVCNKQGYKKGSLLNPNNRPTSDNPLVIEFVKVKEKPEERVGCTAAIYLKLDEVLNVYKIYRWDMAHCHPLHKPEHLCYLRSFREVNEVQGQLALINSKAGMSMRTSYEVLGQGVGGTENLPFRFSDLKNYLMTIR* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4877 236 Pfam FAR1 DNA-binding domain 65 172 IPR004330 -
Mtr4g4877 236 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 33 173 - -
Mtr4g4877 236 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 33 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4877 Mtr-Chr4 62928143 62930412 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr4g4877 FAR1 5.5e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4877 - K17604 mtr:MTR_0558s0020 417.157