Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4871 ATGTGTGAAAAGGAAAACCCTAACTCTCACTCGGCTCTGCTCGATGGAAAATACGAGCTTGGTCGAGTACTCGGTCACGGAACATTTGCTAAGGTTTACCACGCCAAGAATTTGAATACTGGAAAAAACGTAGCCATGAAAGTAGTTGGTAAAGAAAAAGTGATTAAAGTTGGAATGATTGAACAGATCAAAAGAGAAATCTCTGTCATGAAGATGGTCAAACACCCTAACATAGTTCAACTTCACGAAGTCATGGCTTCCAAATCAAAGATCTATATCGCCATGGAACTCGTTCGCGGTGGAGAGCTTTTCAACAAAATCGTCAAAGGTCGACTCAAAGAAGACGTTGCTAGAGTCTATTTCCAGCAGTTGATCTCAGCCGTTGATTTCTGTCACAGTCGCGGTGTTTACCACCGTGATCTCAAGCCGGAGAATCTCCTCCTCGACGAAGACGGTAATCTCAAAGTCTCTGATTTTGGTCTCTGTACTTTCTCTGAACATTTGAGACAAGATGGATTGTTGCATACCACATGTGGTACTCCGGCGTATGTTTCGCCGGAGGTTATCGCGAAGAAGGGTTACGACGGTGCTAAGGCTGATATTTGGTCTTGTGGTGTTATTCTTTACGTTCTTCTGGCTGGATTTTTACCGTTTCAGGATGATAATTTGGTTGCTATGTATAAGAAGATTTACCGCGGTGATTTCAAATGTCCACCGTGGTTTTCTTTGGAAGCTAGGAGGTTAATTACAAAGCTTCTAGATCCGAATCCGAATACAAGAATATCCATATCGAAGATAATGGATTCTAGTTGGTTTAAGAAACCGGTTCCAAAGAGTATAGCGATGAGGAAGAAGGAGAAAGAAGAGGAAGAAGATAAGGTGTTTGAATTTATGGAGTGTGAGAAATCATCGACGACAATGAATGCTTTTCATATAATTTCACTATCAGAAGGATTTGATTTGTCTCCGTTGTTTGAAGAGAAGAAGAGAGAAGAGAGGGAGGAGATGAGATTTGCAACGGGTGGGACGCCGAGTAGAGTGATATCGAAACTGGAACAAGTGGCGAAGGCGGTGAAATTTGATGTGAAGAGTAGTGATACGAAGGTGAGACTTCAAGGGCAAGAAAGAGGGAGGAAAGGAAAGTTGGCTATTGCAGCGGATATTTACGCGGTGACACCGTCGTTTCTGGTGGTGGAGGTGAAGAAAGATAAGGGTGATACTTTGGAGTATAATCAGTTCTGTAGCAAAGAGCTTCGTCCTGCTTTGAAAGATATTTTCTGGACTTCTGCTGACCCTCCAGCTGCTTGA 1308 0.4281 MCEKENPNSHSALLDGKYELGRVLGHGTFAKVYHAKNLNTGKNVAMKVVGKEKVIKVGMIEQIKREISVMKMVKHPNIVQLHEVMASKSKIYIAMELVRGGELFNKIVKGRLKEDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVSDFGLCTFSEHLRQDGLLHTTCGTPAYVSPEVIAKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVAMYKKIYRGDFKCPPWFSLEARRLITKLLDPNPNTRISISKIMDSSWFKKPVPKSIAMRKKEKEEEEDKVFEFMECEKSSTTMNAFHIISLSEGFDLSPLFEEKKREEREEMRFATGGTPSRVISKLEQVAKAVKFDVKSSDTKVRLQGQERGRKGKLAIAADIYAVTPSFLVVEVKKDKGDTLEYNQFCSKELRPALKDIFWTSADPPAA* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4871 435 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4871 435 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524
Mtr4g4871 435 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4871 435 Gene3D Phosphorylase Kinase; domain 1 15 99 - -
Mtr4g4871 435 CDD STKc_SnRK3 17 271 - -
Mtr4g4871 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Mtr4g4871 435 Gene3D Kinase associated domain 1, KA1 301 428 - -
Mtr4g4871 435 Pfam NAF domain 305 363 IPR004041 GO:0007165
Mtr4g4871 435 Gene3D Transferase(Phosphotransferase) domain 1 100 277 - -
Mtr4g4871 435 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4871 435 ProSiteProfiles NAF domain profile. 302 326 IPR018451 GO:0007165
Mtr4g4871 435 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 9 430 - -
Mtr4g4871 435 PANTHER - 9 430 - -
Mtr4g4871 435 SUPERFAMILY Protein kinase-like (PK-like) 15 282 IPR011009 -
Mtr4g4871 435 CDD CIPK_C 308 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4871 Mtr-Chr4 62835190 62837015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4871 9 430 CBL-interacting serine-threonine protein kinases AT4G30960 74.473 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mtr4g4871 Pkinase 2.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4871 - K07198 gmx:100781111 707.597