Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4869 ATGGCTATGCTCCGCAAGTTGTTCTATCGTAAGCCTCCTGATGGTCTCCTCGAGATCTGCGACAGAGTTTACGTTTTTGATTGCTGTTTCACAACGGAAGCTTGGAATGAAGAGAAGTATAAAGTGTATATGGATGGTATAGTAGGTCAGCTTAGAGAGAATGTGCCTGATGCTTCTATTTTGGTTTTCAATTTTCGCGAGGAAGAGACCAAGAGTTTGATGGCAAATATAATATCTGAGTATGACATTACTATAATGGATTATCCTAGGCATTATGAAGGTTGTCCTGTGCTTAAAATGGAGCTCATTCACCACTTTTTAAGGTCTAGTGAAAGTTGGCTTTCACTTGGTCAACACAATGTGTTGTTGATGCATTGTGAACGTGGTGGTTGGCCCGTTATGGCTTTCATGTTAGCTGCATTGTTGATTTATCGGAAGGTTTATAGTGGCGAGCATAGGACTTTGGATATGATTTATCGGCAGTCCCCACACCAGCTTTTACATTTGTTGACGCCGTTGAATCCAATTCCTTCCCAACTGAGGTATCTGCAGTATGTTTCTAGGAGGAATGTGGCCTTAGATTGGCCTCCGCTCGACAGGGCACTCATGTTGGACTGTATTATACTTAGATTCTTCCCAAACTTTGATGGGGAAGGTGGTTGTCATCCATTGTTTAGAATTTATGGACAGGATCCTTTTAGTGCAGATAAAAGTCCTAAAATGCTGTACTCAATGCCAAAGAGAAGTAAAAATGTCCGGGCTTACAAGCAGGGAGAGTGCGAACTAATTAAAATTGATATCAATTGCCATATTCAAGGTGATGTTGTGATCGAGGGTATTAACTTGAATGATGATATGGAGCATGAAATGATGATGTTCCGAGTTATGTTCAACACAGCTTTTGTTAGATCCAATATTCTGATGCTTAATCGCGATGAAATTGATGTTCTATGGGATGCTAAAGATCACTTTCCAAAAGATTTCAGAGCTGAGATCCTTTTCTCAGAGATAGATGCTGCTGCAGCAGTTATTTTAGATAATACATCATTCTTTGAGGAGAAAGATGGACTGCCAATTGAAGCATTTGCCAAGGTTCAAGAGATCTTTAGCCATGTGGACTGGATGAACCCAAAGGCAGATGCTGCACTAAACGTGCTCCAACAAATAAGTACTTCTGCTATCATGAATGACAAGCTGGATAAAGTTTCTGACCAGCATGTGGAAACTGCCACTTCCTTGGGCGAAACAGGTCCTAAAACGCCTCAAAGGAATTCATATGCAGCAATACGGTCTTTATCCTCAACTAAGAGAACCCCAAATAATGATATGAGCAGAAAAGAGGAAAAGACAAACAAAGTAGATTCTATTCCACAGAGGGCTAATACATCAGACATCATCGGTCAGGAGAAAATTTGCTCATCTGAAAAAAGTTTGGAATCCAGTAAATGTCCAACAGGATCAACAAATTTTGACATAAAACCACAGGAATCTAATCTTGCTTCATCTAGTTCTGCAGATTCTTCTCTTTCCCCTGGAACACCTCCTCCGCGGCCTCCCTTGACTACTCGTTCTAAAGAAGTTCATGATTCTCCTCCCCACACAGAATTGCCTCCACATCATATTTTGCCTTCGCAATCAGGACCTCAATCACAAGACAGGAGTTACTCACCTATTTCTAGCTCTACACCTGAGACCTATCATTCCCTTGCACCTGATTCTTCAATTGAGCCATCCCCTCCACTTTCTTCGAGAAAACCTTTGAATGACATTCCACCAGTCAAAACAAGACCCAAGTCTCCCTCTTCGCAGCCTCCAACTCCACCTCCTCCTCCTACCCCTCCACTAAAAGATCAGAAAGTAGTTAGGGCTGGACCTCTCTCCCCACCCCCACCACCTCCTTCTCCAAAGAAGGATATACATGTTAAAGCTGGACCTCCTCCTTCTCCTCCTGTCCCATCTCATATGAATGAGAAACCACATGTTAGAGATGGACTTTCTCCTCCCCCTCCCCCTCTTCCCCCATCACCTCCTCTAAAAGCGGAGCAACCTACTAGGTTTCAGCCCCCGCCACCTCCACCACCACCTCGTCTTTCAGTGGAAGCTGCAAGTCCTATTACAGCACCGCCTGCACCGCCTCCACCTCCATCTGCAACACTTTCCTCTGGTAACCCTAATGCTTCATTGCAAAAGTCTTCACCTGCTCCACCACCTCCAATTCCTTTTGGTAAAGGTCTAAAACCAGGCAGTGCTTTTCCAATGTCCCTTTCTGTGGGAGTTGATGGAAATAAGGTCTCAGGACCTCAATCTAGTTCACTAGCAGGCTCAAAGGGACGAGTTCTACCACGTGCAATTGGCTCAAAAAATGACTCCAAAAAGTTGAAGCCATTGCATTGGATGAAGCTATCTAGAGCAGTGCAAGGAAGTTTGTGGGATGAGACACAAAAATCTGGCGAAGCTTCCAAAGCCCCAGAGATTGATATGTCAGAGCTCGAGAGTCTCTTCTCGGCAGCAGCCCCTAGTTCAGGCCCTGCCAAGAAGTCAAATGTCCAAAGCTCAGTGAAGCCTAAATCTGAGAAAGTGCAACTGATTGATCATAGGCGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAGGTGCCATTGCATGATTTAATGAGCTCAGTGCTAGCACTAGAAGAGTCGGCACTAGACACTGATACTGTCGAGAACCTTATAAAGTTCTGTCCTACAAAAGAGGAGATGGAGATAATTAAGAATTATAACGGGGAAAAGGAGAAATTAGGGAGATGTGAACAGTTCTTCATGGAGTTGATGAAAGTACCACGGGTAGAAGCTAAGCTCAGGGTCTTTTCATTCAGGATTCAGTTCTATTCTCAGGTTTCTGATCTTAAAAATAGCCTAAAAGTTGTGAATTCTTCTGCAGAAGAGATCAGGAATTCTGTCAAATTGAAGAGAATTATGCAAACAATACTTACTCTAGGAAATGCTTTGAATCAAGGAACTGCCAGGGGTTCTGCTATTGGATTCAGATTAGATAGCCTTCTTAAACTCACCGAGACACGGGCACGGAACAACAAAATGACTCTCATGCATTATCTTTGTAAGGTGTTAGATGACAAATTACCAGAAGTCTTAGACTTCTCTAAGGATCTTGCTAACCTAGAGCCAGCAGCAAAGATCCAATTGAAGTTTCTTGCAGAGGAGATGCAAGCTGTAAACAAAGGGTTAGAGAAAGTCGTCCAGGAATTATCCACTTCTGAAAACGATGGTCCTATATCAGAAACGTTCCGCAAGAAATTGAAAGGGTTCCTCTGTTCTGCTGAAGCTGAAGTCCGAACATTGGCTTCACTATATTCTGGTGTGGGCAAGAACGTGGATGCGTTGATTCTTTATTTTGGGGAAGATCCATCTCGCTGTCAATTTGAGCAAGTTGTCACAACTTTGCTCAACTTTACTCGAATGTTCAACAAAGCCCATGAAGAAAATCGTAAGCAGCTAGAGCTTGAAATGAAGAAAACAGCAGAAAGTGATAAAAAGAAATGTGAATCGGAAAGGATATTACCTACAACGATCCGAACTGGCAATGTCAAATAA 3597 0.4281 MAMLRKLFYRKPPDGLLEICDRVYVFDCCFTTEAWNEEKYKVYMDGIVGQLRENVPDASILVFNFREEETKSLMANIISEYDITIMDYPRHYEGCPVLKMELIHHFLRSSESWLSLGQHNVLLMHCERGGWPVMAFMLAALLIYRKVYSGEHRTLDMIYRQSPHQLLHLLTPLNPIPSQLRYLQYVSRRNVALDWPPLDRALMLDCIILRFFPNFDGEGGCHPLFRIYGQDPFSADKSPKMLYSMPKRSKNVRAYKQGECELIKIDINCHIQGDVVIEGINLNDDMEHEMMMFRVMFNTAFVRSNILMLNRDEIDVLWDAKDHFPKDFRAEILFSEIDAAAAVILDNTSFFEEKDGLPIEAFAKVQEIFSHVDWMNPKADAALNVLQQISTSAIMNDKLDKVSDQHVETATSLGETGPKTPQRNSYAAIRSLSSTKRTPNNDMSRKEEKTNKVDSIPQRANTSDIIGQEKICSSEKSLESSKCPTGSTNFDIKPQESNLASSSSADSSLSPGTPPPRPPLTTRSKEVHDSPPHTELPPHHILPSQSGPQSQDRSYSPISSSTPETYHSLAPDSSIEPSPPLSSRKPLNDIPPVKTRPKSPSSQPPTPPPPPTPPLKDQKVVRAGPLSPPPPPPSPKKDIHVKAGPPPSPPVPSHMNEKPHVRDGLSPPPPPLPPSPPLKAEQPTRFQPPPPPPPPRLSVEAASPITAPPAPPPPPSATLSSGNPNASLQKSSPAPPPPIPFGKGLKPGSAFPMSLSVGVDGNKVSGPQSSSLAGSKGRVLPRAIGSKNDSKKLKPLHWMKLSRAVQGSLWDETQKSGEASKAPEIDMSELESLFSAAAPSSGPAKKSNVQSSVKPKSEKVQLIDHRRAYNCEIMLSKVKVPLHDLMSSVLALEESALDTDTVENLIKFCPTKEEMEIIKNYNGEKEKLGRCEQFFMELMKVPRVEAKLRVFSFRIQFYSQVSDLKNSLKVVNSSAEEIRNSVKLKRIMQTILTLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLDDKLPEVLDFSKDLANLEPAAKIQLKFLAEEMQAVNKGLEKVVQELSTSENDGPISETFRKKLKGFLCSAEAEVRTLASLYSGVGKNVDALILYFGEDPSRCQFEQVVTTLLNFTRMFNKAHEENRKQLELEMKKTAESDKKKCESERILPTTIRTGNVK* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4869 1198 MobiDBLite consensus disorder prediction 761 775 - -
Mtr4g4869 1198 SMART PTEN_C2_2 197 336 IPR014020 -
Mtr4g4869 1198 SMART it6_source 783 1198 IPR015425 -
Mtr4g4869 1198 Coils Coil 1157 1177 - -
Mtr4g4869 1198 MobiDBLite consensus disorder prediction 455 510 - -
Mtr4g4869 1198 PANTHER FORMIN-J 667 1180 - -
Mtr4g4869 1198 PANTHER FORMIN-J 1 679 - -
Mtr4g4869 1198 MobiDBLite consensus disorder prediction 624 654 - -
Mtr4g4869 1198 MobiDBLite consensus disorder prediction 405 789 - -
Mtr4g4869 1198 MobiDBLite consensus disorder prediction 440 454 - -
Mtr4g4869 1198 MobiDBLite consensus disorder prediction 663 719 - -
Mtr4g4869 1198 Pfam Formin Homology 2 Domain 788 1156 IPR015425 -
Mtr4g4869 1198 ProSiteProfiles Formin homology-2 (FH2) domain profile. 783 1182 IPR015425 -
Mtr4g4869 1198 Gene3D Formin, FH2 domain 785 1167 IPR042201 -
Mtr4g4869 1198 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Mtr4g4869 1198 MobiDBLite consensus disorder prediction 836 857 - -
Mtr4g4869 1198 MobiDBLite consensus disorder prediction 406 439 - -
Mtr4g4869 1198 SUPERFAMILY Formin homology 2 domain (FH2 domain) 796 1173 - -
Mtr4g4869 1198 Gene3D - 199 339 - -
Mtr4g4869 1198 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Mtr4g4869 1198 MobiDBLite consensus disorder prediction 597 616 - -
Mtr4g4869 1198 Coils Coil 1063 1087 - -
Mtr4g4869 1198 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Mtr4g4869 1198 MobiDBLite consensus disorder prediction 543 581 - -
Mtr4g4869 1198 Gene3D Protein tyrosine phosphatase superfamily 15 198 IPR029021 -
Mtr4g4869 1198 MobiDBLite consensus disorder prediction 841 857 - -
Mtr4g4869 1198 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4869 Mtr-Chr4 62810654 62823950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4869 1 400 Protein tyrosine phosphatase (PTP) family AT5G58160 67.830 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4869 - - gmx:100786096 1736.08