Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4864 ATGGGTTTAGGAGTATTTGGATCTGTTTTGGTTTTGACATTTTTGTTCAAGCATTTAGCCTCACAGCAACCCAACACTGATGAATTCTATGTCTCTGAGTTTTTGAAGAAAATGGGTTTAACATCATCCTCCAAAGTTTACAACTTTTCATCTTCTGTTTGTTCATGGAAAGGTGTTTATTGTGATTCCAATAAGGAACATGTTGTTGAATTGAACCTTTCTGGTATTGGTCTTACTGGTCCAATTCCTGATACAACCATAGGCAAACTCAATAAACTTCACTCTTTGGATCTTAGCAACAACAAAATCACTACTTTGCCTTCAGATTTTTGGAGTTTAACCTCTCTCAAAAGCTTAAACCTTTCTTCCAATCATATTTCAGGTTCATTGACTAACAACATTGGAAACTTTGGTTTACTTGAAAACTTTGACTTGTCAAAAAACAGTTTCTCTGATGAAATTCCTGAAGCTTTGAGTTCCCTTGTGAGTTTGAAGGTTCTCAAACTTGACCACAACATGTTTGTTAGGAGTATTCCTTCAGGGATTCTCAAGTGTCAGTCTCTAGTTTCAATTGATCTTTCATCAAATCAGCTGAGTGGAACCCTTCCACATGGTTTTGGTGATGCTTTTCCTAAGCTTAGGACTTTGAACCTTGCTGAGAATAATATCTATGGTGGTGTGTCAAATTTTTCAAGGTTGAAGTCTATTGTGAGTCTCAACATTTCAGGAAATTCATTTCAAGGTTCTATTATAGAAGTCTTTGTGCTAAAGTTGGAGGCTTTGGACCTTAGCAGAAACCAATTTCAAGGTCACATTTCTCAGGTAAAGTACAACTGGTCTCATTTAGTTTATCTGGATTTGTCTGAGAATCAGCTTAGTGGAGAAATTTTCCAAAACTTGAACAATTCAATGAATTTAAAGCACCTTAGTCTTGCATGCAATAGATTTTCAAGACAGAAATTCCCAAAGATTGAAATGCTCCTAGGATTGGAATATCTTAATTTGTCTAAAACTAGTCTTGTTGGTCACATTCCTGATGAAATCTCACATCTTGGTAATTTGAATGCACTTGATCTTTCTATGAATCATCTTGATGGAAAAATTCCCTTACTGAAGAATAAACATCTTCAAGTTATCGACTTTTCACACAACAATTTGAGTGGACCAGTCCCTTCCTTTATCTTGAAGAGTCTCCCAAAGATGAAGAAATACAACTTCTCATATAATAACTTAACCCTTTGTGCCTCAGAAATCAAGCCTGATATCATGAAAACATCGTTCTTTGGATCAGTTAACAGCTGCCCAATAGCTGCAAATCCGAGTTTTTTCAAAAAAAGAAGAGACGTCGGCCACAGGGGAATGAAGCTAGCTCTTGTATTAACCCTCTCGTTGATATTTGCGCTTGCTGGTATTCTGTTCCTAGCATTTGGTTGCAGAAGGAAAAATAAAATGTGGGAAGTGAAACAAGGTTCATACAGAGAAGAACAGAATATCTCAGGTCCATTTTCTTTCCAAACTGATTCAACAACTTGGGTAGCTGATGTCAAACAGGCAACATCAGTTCCGGTAGTAATCTTTGAGAAGCCACTGTTAAATATTACATTTGCAGATCTCTTATCTGCAACTTCAAATTTTGATAGAGGTACCCTTTTGGCTGAAGGAAAATTTGGACCTGTCTATAGAGGCTTTCTACCTGGAAATATTCATGTAGCAGTTAAAGTGTTGGTTGTTGGTTCAACATTGACGGATGAAGAAGCTGCAAGAGAGCTTGAGTTTCTTGGTAGAATCAAGCATCCTAATCTAGTTCCTTTAACCGGTTATTGTGTAGCTGGTGATCAAAGGATCGCTATATATGATTACATGGAGAATGGAAACTTGCAAAATCTTCTTTATGATTTGCCACTTGGTGTTCAAAGCACAGATGATTGGAGCACAGATACTTGGGAAGAAGCTGATAATGGAATTCAAAATGTTGGTTCTGAAGGATTGCTCACAACTTGGAGATTTCGACACAAAATCGCACTTGGAACTGCAAGAGCATTGGCTTTTCTGCATCATGGATGTTCTCCTCCAATAATTCATAGAGCGGTTAAAGCTAGCAGTGTTTATTTGGATTATGATTTGGAGCCAAGGTTGTCTGATTTTGGTCTTGCCAAGATTTTTGGAAGTGGTTTGGACGAAGAGATTGCACGCGGTTCTCCCGGCTATGTTCCACCGGAGTTTTCTCAACCGGAATTTGAGTCTCCAACACCGAAATCGGATGTATATTGTTTTGGTGTTGTTCTTTTTGAGCTACTAACTGGAAAGAAGCCGGTTGGAGATGATTACACTGATGATAAAGAAGCAACAACTTTGGTAAGTTGGGTTAGAGGACTTGTAAGGAAGAATCAAACTTCAAGAGCTATTGATCCGAAAATTTGCGATACAGGATCGGATGAACAAATAGAGGAGGCTCTTAAAGTTGGATATCTATGCACAGCTGATTTACCTTTCAAAAGACCAACCATGCAGCAGATAGTTGGACTTCTAAAGGATATTGAACCTACAACTAGTTAG 2556 0.3783 MGLGVFGSVLVLTFLFKHLASQQPNTDEFYVSEFLKKMGLTSSSKVYNFSSSVCSWKGVYCDSNKEHVVELNLSGIGLTGPIPDTTIGKLNKLHSLDLSNNKITTLPSDFWSLTSLKSLNLSSNHISGSLTNNIGNFGLLENFDLSKNSFSDEIPEALSSLVSLKVLKLDHNMFVRSIPSGILKCQSLVSIDLSSNQLSGTLPHGFGDAFPKLRTLNLAENNIYGGVSNFSRLKSIVSLNISGNSFQGSIIEVFVLKLEALDLSRNQFQGHISQVKYNWSHLVYLDLSENQLSGEIFQNLNNSMNLKHLSLACNRFSRQKFPKIEMLLGLEYLNLSKTSLVGHIPDEISHLGNLNALDLSMNHLDGKIPLLKNKHLQVIDFSHNNLSGPVPSFILKSLPKMKKYNFSYNNLTLCASEIKPDIMKTSFFGSVNSCPIAANPSFFKKRRDVGHRGMKLALVLTLSLIFALAGILFLAFGCRRKNKMWEVKQGSYREEQNISGPFSFQTDSTTWVADVKQATSVPVVIFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGNIHVAVKVLVVGSTLTDEEAARELEFLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVQSTDDWSTDTWEEADNGIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRAVKASSVYLDYDLEPRLSDFGLAKIFGSGLDEEIARGSPGYVPPEFSQPEFESPTPKSDVYCFGVVLFELLTGKKPVGDDYTDDKEATTLVSWVRGLVRKNQTSRAIDPKICDTGSDEQIEEALKVGYLCTADLPFKRPTMQQIVGLLKDIEPTTS* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4864 851 Gene3D Ribonuclease Inhibitor 323 434 IPR032675 -
Mtr4g4864 851 ProSiteProfiles Leucine-rich repeat profile. 92 113 IPR001611 GO:0005515
Mtr4g4864 851 Pfam Leucine Rich repeat 280 295 IPR001611 GO:0005515
Mtr4g4864 851 Gene3D Ribonuclease Inhibitor 179 255 IPR032675 -
Mtr4g4864 851 Pfam Protein kinase domain 549 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4864 851 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 1 848 - -
Mtr4g4864 851 SMART LRR_typ_2 113 137 IPR003591 -
Mtr4g4864 851 SMART LRR_typ_2 161 185 IPR003591 -
Mtr4g4864 851 SMART LRR_typ_2 90 112 IPR003591 -
Mtr4g4864 851 SMART LRR_typ_2 327 351 IPR003591 -
Mtr4g4864 851 Pfam Leucine rich repeat 187 245 IPR001611 GO:0005515
Mtr4g4864 851 Pfam Leucine rich repeat 69 126 IPR001611 GO:0005515
Mtr4g4864 851 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 848 - -
Mtr4g4864 851 Gene3D Phosphorylase Kinase; domain 1 505 620 - -
Mtr4g4864 851 Gene3D Ribonuclease Inhibitor 256 322 IPR032675 -
Mtr4g4864 851 SUPERFAMILY L domain-like 42 415 - -
Mtr4g4864 851 Gene3D Ribonuclease Inhibitor 31 178 IPR032675 -
Mtr4g4864 851 ProSiteProfiles Protein kinase domain profile. 545 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4864 851 SUPERFAMILY Protein kinase-like (PK-like) 522 843 IPR011009 -
Mtr4g4864 851 Gene3D Transferase(Phosphotransferase) domain 1 621 851 - -
Mtr4g4864 851 PRINTS Leucine-rich repeat signature 93 106 - -
Mtr4g4864 851 PRINTS Leucine-rich repeat signature 113 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4864 Mtr-Chr4 62759308 62762691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4864 68 847 Receptor kinase-like Gene Family AT4G39400 33.009 8.46e-110 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Mtr4g4864 Pkinase 2.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4864 - - gmx:100797738 1392.1