Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4862 ATGTATGTCCCTCTCATGCTAGTTGAGCTGCTGAGTTCGGGGCTGAAAAGATCGCAACTCCACATATCACCATGTCTGACTAAAAACATCACTTTGAACCTGCTGCCGATGCCGGAGTATCCAAAAACCTACCCTCTACAGGCTGGTAACATTCGCAGGAACGGTTACATCGTCATTGAGTCCAGGCCTTGCAAGGTTCCTCATGTGAATCGTGCTGACGATCGGTTGATTGATATTTCTGAAGATGGATCTTCCAACTGCTGA 264 0.4735 MYVPLMLVELLSSGLKRSQLHISPCLTKNITLNLLPMPEYPKTYPLQAGNIRRNGYIVIESRPCKVPHVNRADDRLIDISEDGSSNC* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4862 87 PANTHER BNAA07G09420D PROTEIN 64 83 - -
Mtr4g4862 87 PANTHER BNAA07G09420D PROTEIN 42 66 - -
Mtr4g4862 87 Gene3D - 40 74 IPR014722 -
Mtr4g4862 87 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 64 83 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Mtr4g4862 87 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 42 66 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Mtr4g4862 87 SUPERFAMILY Translation proteins SH3-like domain 41 72 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4862 Mtr-Chr4 62749843 62752445 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4862 42 83 Eukaryotic Initiation Factors Gene Family AT1G13950 40.964 2.29e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4862 K03263 K02180 gmx:100305510 56.6102