Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4861 ATGGCTGAGCATCGCGTCTCTGAAGCTCTCCCTGTGGGACCCACTCAGCTTCCCCCAGAACAACAAAAAGCTCAAGAGATAAAGGAACCAGTCGGTGAATCACCGTTAGCTACCCAGTCGCAGAAAAGCGAATTACCGAGTTCTGATGAAAATTCGAATTCAGAAACCCTAATTGCTTTTCCATCTTCGGTTTTGGATCAACCGAGTTTCGATGTGCAAGGAATCCCTGATACTCTGAGTTCTGTTGCCAAATCCGAAATTAAGGAAACGGTTGGACCTCCTGAAAATGAAAAGGAAGTTGCTAAAAGTGAAGCTGCCCAGGAACCTTCAGCTCAGGCCGAATATCAGATTCAAGTGACTGTGTCTTTAACTCCACCGTCTGAACTATCCCCAAATTCTGTTGCAAAATCTTTTTCATCCGTTCCTAGTCCAACCATACAAATACAGAATATGTCTCCTCCAAACGTTAGTAATACGCCTGTGGCAGAAGTAAACAAAAAAAATACTTCTGGTGGTAGAGCCTTGTCTTCTGTTTCTGTTCCAAGGACACCATCATCTGATGGATTCAACTGGCGGAAATATGGGCAGAAGCAAGTTAAGAGTCCTACTACAGGTTCTCGAAGCTATTACAGGTGTACTCAATCAAACTGTTGTGCTAAGAAGATTGAATGCTGGGATCATTCAGGTCATGTGATAGAGACTGTTTATAAAAGTGAGCACAGTCATGATCCCCCACGGAAGATTAGTTCCATTAGGGAAAGTAAGTTTGCGCCCTCCAACGAACCAACTGCAGAGAACAGTGTTTTAGTGAAGCCTGCCGATGCTCTGAAAGATTCTGATCCATCCACATCTTCCAAAGCTCAAGAAGAAACACCTTGCAGCTCTGACAAGAAACTACAAAACTCATCTGATATCAATGGTAATGGTAAAATAGTTTTGAACGAGGAACATGTTGACGAGCCAGATCCAAAACGAAGAAAGGATAAAGGCGACTTGGTTCACTCAGATTCTCCTGTAAAACCTGAAAAGAAACCCAAGTTTGTTGTACATGCAGCAGGAGATGTGGGGATATCTGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGTAACCCACATCCCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTTCGAAAGCACGTTGAGACTGCCGTGGACAGCTCAGATGCTGTCATCATAACTTACAAGGGTGTACATGATCATGACACTCCTGTGCCGAAGAAACGACATGGTCCACCGAGTGCTCCTCTTGTGGCTGCTGCAGCACCTGCCTCCATGAATAATTTGCAGTGCCCACCAAGTGCTCCTCTTGTGGCTGATGCAGCACCTGCCTCATTGAATAATTTGCAGTTGAGTAAACCAGACTCGCCGCAAAATCAGAAAATTTCTACTCAATGGTCAGTGGACACAGAAGGAGAACTAACTGGGGAAGCCAAGGACCTTGGGGGTGAGAAAGCAATAGAGTCAGCTCGAACACTTCTGAGCATAGGTTTTGAAATCAAGCCTTGCTGA 1554 0.4505 MAEHRVSEALPVGPTQLPPEQQKAQEIKEPVGESPLATQSQKSELPSSDENSNSETLIAFPSSVLDQPSFDVQGIPDTLSSVAKSEIKETVGPPENEKEVAKSEAAQEPSAQAEYQIQVTVSLTPPSELSPNSVAKSFSSVPSPTIQIQNMSPPNVSNTPVAEVNKKNTSGGRALSSVSVPRTPSSDGFNWRKYGQKQVKSPTTGSRSYYRCTQSNCCAKKIECWDHSGHVIETVYKSEHSHDPPRKISSIRESKFAPSNEPTAENSVLVKPADALKDSDPSTSSKAQEETPCSSDKKLQNSSDINGNGKIVLNEEHVDEPDPKRRKDKGDLVHSDSPVKPEKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHVETAVDSSDAVIITYKGVHDHDTPVPKKRHGPPSAPLVAAAAPASMNNLQCPPSAPLVADAAPASLNNLQLSKPDSPQNQKISTQWSVDTEGELTGEAKDLGGEKAIESARTLLSIGFEIKPC* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4861 517 MobiDBLite consensus disorder prediction 236 345 - -
Mtr4g4861 517 MobiDBLite consensus disorder prediction 167 192 - -
Mtr4g4861 517 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 444 IPR044810 GO:0003700
Mtr4g4861 517 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 450 515 IPR044810 GO:0003700
Mtr4g4861 517 SMART WRKY_cls 185 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g4861 517 SMART WRKY_cls 358 417 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g4861 517 MobiDBLite consensus disorder prediction 278 309 - -
Mtr4g4861 517 ProSiteProfiles WRKY domain profile. 186 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g4861 517 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 450 515 - -
Mtr4g4861 517 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 1 444 - -
Mtr4g4861 517 Pfam WRKY DNA -binding domain 187 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g4861 517 Pfam WRKY DNA -binding domain 360 415 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g4861 517 SUPERFAMILY WRKY DNA-binding domain 354 418 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g4861 517 Gene3D WRKY domain 344 419 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g4861 517 Gene3D WRKY domain 172 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g4861 517 ProSiteProfiles WRKY domain profile. 353 418 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g4861 517 MobiDBLite consensus disorder prediction 313 345 - -
Mtr4g4861 517 MobiDBLite consensus disorder prediction 236 250 - -
Mtr4g4861 517 MobiDBLite consensus disorder prediction 90 104 - -
Mtr4g4861 517 MobiDBLite consensus disorder prediction 1 113 - -
Mtr4g4861 517 MobiDBLite consensus disorder prediction 34 85 - -
Mtr4g4861 517 SUPERFAMILY WRKY DNA-binding domain 181 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4861 Mtr-Chr4 62736438 62742251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4861 120 517 WRKY Transcription Factor Family AT4G30935 53.102 3.63e-122 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr4g4861 WRKY 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4861 - - gmx:100127377 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4861 4 62736438 62742251 Mtr4g4861 4 62736438 62742251 ECH