Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4857 ATGTTTGACCGAAGTGATTACAAATCACAGTACATGGATGGCCAGCGAGAAAGTTCTTTTAGGTGGGATTTCTTGGATTCTAAACTATCTTCATCTTCCGATGTTAGAGTTACAAAATCTGGATTCAGTATTGATAAATTAAACCATGGTAGTCATGGAAGCAGCACAACCTCTAGGTCTTTTAAAAAAGGAATGAGAAAGGGATCTGAAGGACTGAAGTTAATTGGTCGATCACTTGGGCTGGGGGTATCTAAGGCAGTGTTTCCAGAAGATCTTAAAGTGTCTGAAAAGAAGATATTTGATCCCCAAGACAAATTTTTACTCTTATGGAATAAATTATTTGTTATCTCATGCATTTTTTCCGTGTTTGTGGATCCACTGTTTTTTTATCTCCCTGTCATCAATGATCAATTACACTGTCTGGGTATAGACCGAAAGTTGGCGATAATAGTCACCACCTTGAGGACAGTCATTGATGCTTTCTATTTGCTAAACATGGCTCTCCAATTTCGTACTGCTTACATTGCTCCATCATCTCGTGTCTTTGGGCGGGGAGAGCTTGTGATAGATTCGGCACAGATAGCCAAGCGATACTTGCGACGATATTTCATCGTTGATTTCCTATCTGTGTTGCCAGTACCACAGATTGTTGTTTGGAGATTTCTTCAGAGGTCAAAAAGTTCTGATGTACTAGCAACAAAGCAGGCCTTGCTGTTCATTATCTTGCTTCAGTATATTCCTAGATTTCTTCGAATGGTGCCATTAACTTCAGAACTTAAGAGAACAGCCGGTGTCTTTGCCGAAACTGCATGGGCAGGTGCTGTATATTATTTGCTGTTGTACATGCTTGCCAGTCATATAGTTGGTGCTTTTTGGTACTTGTTAGCTATTGAACGCAATGACTCGTGCTGGCAGAATGCTTGCAGCGACAATGGGTGCAACAAAAACTACTTGTACTGTGAGAACCAGCACACGGAAGGTTATAGTGCCTGGCAAAACAAAAGCAAAGCTATTTTTAAGTCAAAGTGCTCTGTAGATGATGATCCTCCACCTTTTGATTATGGAATTTTTAAGCAAGCCTTGTCATCTGGTATCATTTCATCTAAGAAGTTTATCACAAAATATCTTTACTGTTTATGGTGGGGGCTCCAGAATTTAAGTACCCTTGGTCAGGGGCTTCAAACTAGCACATATCCTGGGGAGGTTATCTTTTCAATAGCACTTGCCATAGCAGGTCTCATCCTCTTCGCGCTTCTGATTGGCAACATGCAGACATATCTTCAGTCCCTTACCCTTAGGCTGGAGGAAATGAGAGTCAAAAGGCGTGATTCAGAACAATGGATGCATCATCGCTTGCTCCCAAAAGAGCTTAGAGAGCGTGTGAGACGGTATGATCAATATAAGTGGTTGGCAACACGTGGTGTAGACGAAGATATTTTAGTTCAGAGTCTACCAAAGGATCTTCGAAGAGATATTAAGCGTCATCTCTGTTTGGCTTTAGTGAGGAGGGTTCCACTATTTGAGAGTATGGATGAGAGATTGCTTGATGCCATATGTGAGAGACTGAAACCATGTTTATTTACAGAGAATACTTATATTGTTCGGGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATACGTGGGCGTCTTGAGAGTGTTACCACAGATGGTGGGAGGAGTGGTTTTTTCAACCGCACATATCTAAAGGAGGCCGAATTCTGTGGGGAGGAGCTTTTAACATGGGCCCTGGACCCCAGATCTGGTTCTAATCTTCCAACCTCTACTCGAACTGTGAAGGCGTTAACAGAGGTTGAGACTTTTGCCTTAACCGCCGATGAGCTGAAATTTGTTGCCAGTCAGTTTAGACGTCTTCACAGTAGACAGGTTCAACACACTTTTCGTTTTTACTCTCAACAATGGAGAACCTGGGCTGCTTGTTTTATTCAAGCAGCATGGCGTCGATATTGTAAAAAGAAAATTATGAAGCTTCGTATGAAGGAAGAAGAAGCGGATGAGTCTCACGGCAATGCCAGTGGCAGTTCCTCCAGCCTTGGTGCCGCCTTATTAGCCTCAAAGTTTGCCGCGCGCACTCTCCGTGGTGTACACCGCAATCGACTCGCCAAGACTGCCAGAGAGTTGGTGAAATTACAGAAACCCCCCGAGCCTGACTTTACAGCAGATGATGCAGACTAA 2196 0.4285 MFDRSDYKSQYMDGQRESSFRWDFLDSKLSSSSDVRVTKSGFSIDKLNHGSHGSSTTSRSFKKGMRKGSEGLKLIGRSLGLGVSKAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCIFSVFVDPLFFYLPVINDQLHCLGIDRKLAIIVTTLRTVIDAFYLLNMALQFRTAYIAPSSRVFGRGELVIDSAQIAKRYLRRYFIVDFLSVLPVPQIVVWRFLQRSKSSDVLATKQALLFIILLQYIPRFLRMVPLTSELKRTAGVFAETAWAGAVYYLLLYMLASHIVGAFWYLLAIERNDSCWQNACSDNGCNKNYLYCENQHTEGYSAWQNKSKAIFKSKCSVDDDPPPFDYGIFKQALSSGIISSKKFITKYLYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAIAGLILFALLIGNMQTYLQSLTLRLEEMRVKRRDSEQWMHHRLLPKELRERVRRYDQYKWLATRGVDEDILVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRTYLKEAEFCGEELLTWALDPRSGSNLPTSTRTVKALTEVETFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYCKKKIMKLRMKEEEADESHGNASGSSSSLGAALLASKFAARTLRGVHRNRLAKTARELVKLQKPPEPDFTADDAD* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4857 731 MobiDBLite consensus disorder prediction 712 731 - -
Mtr4g4857 731 ProSiteProfiles IQ motif profile. 642 671 IPR000048 GO:0005515
Mtr4g4857 731 Pfam Ion transport protein 109 433 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mtr4g4857 731 PRINTS EAG/ELK/ERG potassium channel family signature 166 175 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr4g4857 731 PRINTS EAG/ELK/ERG potassium channel family signature 375 392 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr4g4857 731 PRINTS EAG/ELK/ERG potassium channel family signature 401 412 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr4g4857 731 PRINTS EAG/ELK/ERG potassium channel family signature 419 428 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr4g4857 731 PRINTS EAG/ELK/ERG potassium channel family signature 469 476 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr4g4857 731 PANTHER NUCLEOTIDE-GATED ION CHANNEL, PUTATIVE-RELATED 17 728 - -
Mtr4g4857 731 SUPERFAMILY Voltage-gated potassium channels 101 428 - -
Mtr4g4857 731 SMART cnmp_10 506 637 IPR000595 -
Mtr4g4857 731 ProSiteProfiles cAMP/cGMP binding motif profile. 506 590 IPR000595 -
Mtr4g4857 731 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 17 728 - -
Mtr4g4857 731 Pfam Cyclic nucleotide-binding domain 527 617 IPR000595 -
Mtr4g4857 731 CDD CAP_ED 506 637 IPR000595 -
Mtr4g4857 731 SUPERFAMILY cAMP-binding domain-like 435 626 IPR018490 -
Mtr4g4857 731 Gene3D Jelly Rolls 504 624 IPR014710 -
Mtr4g4857 731 Gene3D Helix hairpin bin 434 497 - -
Mtr4g4857 731 Gene3D - 111 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4857 Mtr-Chr4 62689396 62695791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4857 12 728 Ion Channels AT5G57940 76.806 0.0 1130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4857 K05391 - gmx:100784309 1238.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4857 4 62689396 62695791 Mtr4g4857 4 62689396 62695791 ECH