Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4856 ATGTTATGGCTCACCATTTCACCAAAACATACCGTTGTTTCTAATTGGGAAGTGCCTCTTTCAGCAACAAAAAAAAAAGATTATCTGGTCGGAGACAGTGAAAATTCATGGAAGTTTCCTCTTCCAACTCGACATGCACTCACCCGTTGGGCCTCTAACTACCAATTCATAGTCGGTGACACTATCACATTTCAGTACAATAACAAAACAGAATCGGTACACGAAGTGGAAGAGGAAGACTATGATAGATGTGGAATAAGAGGAGAGCATGTAGACCACTACGACGGCAATACAATGGTGGTGCTTAAGAAAACAGGAATACATCATTTCATAAGTGGAAAAAAGCGTCATTGCAGGTTGGGTTTAAAGCTAGCTGTTGTTGTTATGGTAGCTCCCGTACTTTCTTCCCCTCCTCCGCCGCCTTCACCACCCACGCCTCGGTCATCAACTCCAATTCCTCATCCTCCGAGACGTTCACTGCCTTCACCTCCTTCACCGTCACCATCACCTTCACCATCACCATCACCATCACCATCACCTCGGTCAACTCCAATTCCTCATCCTCGGAAACGTTCACCAGCTTCACCATCACCATCACCATCACTGTCAAAGTCGCCTTCACCCTCCGAGTCACCATCACTGGCACCGTCACCTTCAGATTCAGTAGCTTCATTGGCACCGTCATCTTCACCTTCAGACGAGTCACCTTCACCGGCACCGTCCCCAAGTTCATCTGGTAGTAAAGGTGGTGGTGCTGGCCATGGATTCTTGGAAGTTTCAATCGCTATGATGATGTTCTTAATTTTCTAG 810 0.4679 MLWLTISPKHTVVSNWEVPLSATKKKDYLVGDSENSWKFPLPTRHALTRWASNYQFIVGDTITFQYNNKTESVHEVEEEDYDRCGIRGEHVDHYDGNTMVVLKKTGIHHFISGKKRHCRLGLKLAVVVMVAPVLSSPPPPPSPPTPRSSTPIPHPPRRSLPSPPSPSPSPSPSPSPSPSPRSTPIPHPRKRSPASPSPSPSLSKSPSPSESPSLAPSPSDSVASLAPSSSPSDESPSPAPSPSSSGSKGGGAGHGFLEVSIAMMMFLIF* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4856 269 ProSiteProfiles Phytocyanin domain profile. 26 130 IPR003245 GO:0009055
Mtr4g4856 269 CDD Phytocyanin 26 128 - -
Mtr4g4856 269 Gene3D - 25 134 IPR008972 -
Mtr4g4856 269 PRINTS Proline rich extensin signature 135 156 - -
Mtr4g4856 269 PRINTS Proline rich extensin signature 157 173 - -
Mtr4g4856 269 PRINTS Proline rich extensin signature 183 200 - -
Mtr4g4856 269 MobiDBLite consensus disorder prediction 135 254 - -
Mtr4g4856 269 SUPERFAMILY Cupredoxins 26 129 IPR008972 -
Mtr4g4856 269 MobiDBLite consensus disorder prediction 206 232 - -
Mtr4g4856 269 PANTHER BLUE COPPER PROTEIN 21 269 IPR039391 GO:0009055
Mtr4g4856 269 Pfam Plastocyanin-like domain 37 121 IPR003245 GO:0009055
Mtr4g4856 269 MobiDBLite consensus disorder prediction 135 205 - -
Mtr4g4856 269 PANTHER EARLY NODULIN-55-2 21 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4856 Mtr-Chr4 62679049 62681826 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4856 26 156 Phytocyanin Superfamily AT5G57920 33.813 7.49e-21 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4856 - - mtr:MTR_4g130800 310.071