Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4855 ATGTTCAAAATACAGTCATTGTTGACCAACAACCGGGAAAGGGTAATTATACAACAATCATATCTGCCTGCCATATATTCTATAGAGCAAAATAACAATCAATGGTTTAAGATTCACATAAATCCGGGCATCTATTGGGAAACGATTACTATTCCCATTTCGAGTCCATGTATCATTTTAGAAGGATCCGGTAGCAACGCTACAACAATTATTTCTAGTCAACGTGAAACAACATCAGATTGGGGATCTACATTCAGTTCATTCGCAACTAATGTGATTGTGAGTGACATTACTTTCAAGAACTCATATAATTTGGAAGGAGGTTCAGATGATATCGAACAGGCATTGTCAGCTGCTTTCTACGGAGACAAATCTGCAATCTTTAACAGTAGTTTTATGAGTTATCAAGATACTTTGTTTGCAGCAAAGGGACGACACTACTTTAAAGACATGTTATGTTATATTCAAGGTGATGTCGACTTTATTTTTGGTTCTGGCCAATCTTATTTTGAGAATTGTATGATAAATGCCACACAGAAGGATTCGGAACCTTCAGGTTTTGTGACTGCTCAACGTAGGGAAAATGATTCTGATACAAGTGATTCTGCTCAACGTAGGGAACGTGTCTCTTGGATGAAAAAAAAAAACCTAAATAACTCAGAAGTAAATGAATATTCTTTATCATCTTTCATAAATAAGAATGGATGGCTTACCAACATACTATATATCCTCGTAAACTTCTTGTTGTAG 750 0.356 MFKIQSLLTNNRERVIIQQSYLPAIYSIEQNNNQWFKIHINPGIYWETITIPISSPCIILEGSGSNATTIISSQRETTSDWGSTFSSFATNVIVSDITFKNSYNLEGGSDDIEQALSAAFYGDKSAIFNSSFMSYQDTLFAAKGRHYFKDMLCYIQGDVDFIFGSGQSYFENCMINATQKDSEPSGFVTAQRRENDSDTSDSAQRRERVSWMKKKNLNNSEVNEYSLSSFINKNGWLTNILYILVNFLL* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4855 249 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 199 243 - -
Mtr4g4855 249 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 20 200 - -
Mtr4g4855 249 SUPERFAMILY Pectin lyase-like 24 239 IPR011050 -
Mtr4g4855 249 Pfam Pectinesterase 24 199 IPR000070 GO:0030599|GO:0042545
Mtr4g4855 249 PANTHER PECTINESTERASE 20 200 - -
Mtr4g4855 249 PANTHER PECTINESTERASE 199 243 - -
Mtr4g4855 249 MobiDBLite consensus disorder prediction 184 206 - -
Mtr4g4855 249 Gene3D - 22 209 IPR012334 -
Mtr4g4855 249 ProSitePatterns Pectinesterase signature 2. 155 164 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4855 Mtr-Chr4 62673971 62678681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4855 24 198 Carbohydrate Esterase AT2G19150 41.011 7.67e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4855 - - mtr:MTR_4g130790 445.277