Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4854 ATGAATATGGCTTCTTCTTCTCCAATATTGTTGATGATCATTTTCTCAATGTGGCTGCTAATTTCCCACTCTGAATCCACAGATTATCTGATTGGAGACAGTCACAATTCCTGGAAGGTTCCTCTTCCATCACGACGTGCATTCGCCCGCTGGGCCTCTGCTCACGAATTCACAGTCGGTGATACCATCCTGTTTGAGTACGATAACGAAACAGAATCAGTGCACGAAGTGAATGAGCATGATTATATAATGTGTCATACAAATGGAGAACATGTGGAGCACCACGACGGCAACACTAAGGTTGTGCTTGATAAAATAGGAGTATATCATTTCATAAGTGGAACAAAGCGTCATTGCAAGATGGGATTAAAGCTGGCTGTCGTTGTCCAAAACAAGCATGACCTAGTTCTCCCACCTCTAATTACAATGCCTATGCCACCTTCGCCTTCACCGTCACCAAATTCGTCCGGTAATAAAGGTGGTGCTGCTGGTCTTGGATTCATCATGTGGTTGGGGGTTTCATTGGTGATGATGATGTTCTTAATATGA 549 0.4353 MNMASSSPILLMIIFSMWLLISHSESTDYLIGDSHNSWKVPLPSRRAFARWASAHEFTVGDTILFEYDNETESVHEVNEHDYIMCHTNGEHVEHHDGNTKVVLDKIGVYHFISGTKRHCKMGLKLAVVVQNKHDLVLPPLITMPMPPSPSPSPNSSGNKGGAAGLGFIMWLGVSLVMMMFLI* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4854 182 ProSiteProfiles Phytocyanin domain profile. 27 131 IPR003245 GO:0009055
Mtr4g4854 182 PANTHER BLUE COPPER PROTEIN 13 182 IPR039391 GO:0009055
Mtr4g4854 182 SUPERFAMILY Cupredoxins 26 130 IPR008972 -
Mtr4g4854 182 Gene3D - 26 134 IPR008972 -
Mtr4g4854 182 CDD Phytocyanin 27 129 - -
Mtr4g4854 182 Pfam Plastocyanin-like domain 38 122 IPR003245 GO:0009055
Mtr4g4854 182 PANTHER EARLY NODULIN-55-2 13 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4854 Mtr-Chr4 62672550 62673629 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4854 3 182 Phytocyanin Superfamily AT4G31840 32.967 1.81e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4854 - - mtr:MTR_4g130800 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4854 4 62672550 62673629 Mtr4g4854 4 62672550 62673629 ECH