Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4847 ATGCCTTCACGTTGTGAAATTTGCTGTGAGATTATGATCGCTGTCTTGCTCCCTCCTTTGGGTGTTTGTCTCCGCCATGGTTGCTGCACTGTTGAATTCATTATTTGCTTGCTCCTAACTATACTAGGATATCTTCCTGGTATAATTTATGCTCTCTATGCCATTATCTTTATTGATCGTGATCAGTACTTTGATGAATATAGGCGTCCTTTGTATGCACAATCACAATACTAG 234 0.3974 MPSRCEICCEIMIAVLLPPLGVCLRHGCCTVEFIICLLLTILGYLPGIIYALYAIIFIDRDQYFDEYRRPLYAQSQY* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4847 77 PANTHER BNAA03G50460D PROTEIN 1 73 - -
Mtr4g4847 77 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 73 IPR000612 GO:0016021
Mtr4g4847 77 Pfam Proteolipid membrane potential modulator 8 55 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4847 Mtr-Chr4 62619322 62620162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4847 1 75 RCI2 Gene Family AT4G28088 80.263 1.42e-41 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4847 - - mtr:MTR_4g130675 153.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4847 4 62619322 62620162 Mtr4g4847 4 62619322 62620162 ECH