Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4834 ATGATGTGTTTTTTTAAACAACTTACAATGCTTCTATTTTATTTTCTTGTCCTTGTTCATTCTAGAGTTCATGATGAGGAAAATATTGGTCTTATGAATGATAAAAATTCACTTGTTTCATTCATGTCATACATTATTTCGGACCCCGAAAACGCGCTAAAGAGTTGGAAATTAACTGTTGTTCATGTTTGTGATTGGTCAGGTGTTAAATGCAACAATGAAAGTAATAATAAGAGGATCATAGAGCTTGATCTTAGTGGAAAATCACTAGGAGGAACTATTTCCCCTGCTCTTGCTAACCTCTCTTTGTTGCAAATTCTTGACCTTTCTGGGAATCTTTTGGTGGGTCACATTCCAAGAGAATTAGGCTATTTAGTTCACCTTGAACAACTTAGTTTATCTTGGAATTTACTTCAAGGAGACATTCCTTTAGAATTTGGTTCACTTCACAACTTGTACTACCTTGACTTGGGAAGCAATCAACTTGAGGGAGAGATTCCTCCACCCCTTTTATGCAATGTTACTTCATTGAGTTATATAGACCTCTCTAATAATTCATTAGGTGGAAAAATCCCATTAAACAATAAGTGTATCATTAAGGAGCTTAAGTTCTTCTTGCTTTGGTCTAACAAACTTGTAGGACAAGTTCCTTTGGCTCTTTCAAATTCTACTAAGCTTAAATGGCTTGATTTGGAGTCAAATATGTTGAGTGGAGAACTTCCATCTAAGATTATATGTAATTTTCCACAATTACAATTCCTTTACTTATCGTATAACAATTTTGTTAGCCATGATGGTAACACTAACCTCGAACCTTTCTTTGCTTCTTTGATGAATTCATCAAACTTTCAAGAACTTGAATTGGCCGGAAACAGTCTCGGTGGGAGGCTGCCTCATATTATTGGTAATCTTCCTTCAAGCTTGCAACACCTTCACCTTGAAGAAAATCTCATACATGGCTCTATTCCACCTCACATTGCCAACCTTGCCAACTTAACTTTCTTAAAGTTGTCTAGTAACCGAATAAACGGAACAATACCTCACAGCCTATGCAAGATTAATAGGCTAGAGAGAATGTATTTGTCAAAGAATTATCTATCTGGTGAGATTCCTTCAACTCTTGGCGACATCCAACATCTTGGACTACTTGATTTGTCAAAAAACAAGCTTTCTGGTTCGATACCGGATAGTTTCGCAAAACTCGCTCAGTTAAGAAGGCTTTTACTTCATGAAAACCACCTTTCTGGGACAATCCCACCAACTCTAGGAAAATGTGTCAACTTGGAGATTCTAGACTTGTCTCACAACAAGATCACAGGGATGATTCCTTCAGAAGTTGCAGCATTGACTAGCTTGAAACTATACTTGAATTTATCAAACAATGAGTTACAAGGGATTTTACCATTAGAACTAAGCAAAATGGATATGGTGCTTGCTATTGACGTATCTATGAATAATTTCTCTGGTGGAATTCCACCACAACTTGAAAATTGCATAGCATTAGAATATCTCAATCTTTCTGGTAATTTCTTTGAAGGTCCTCTCCCTTATACATTAGGCCAACTGCCTTATATTCAATCACTTGATATATCTTCAAACCAATTGAATGGAACAATACCAGAGTCACTCCAGTTATGTTCCTATCTCAAAGCACTTAACTTCTCTTTCAACAAATTCTCAGGAAATGTCTCAAACAAAGGAGCGTTTTCATCTTTAACCATAGATTCTTTCCTAGGAAACAATAATCTATGTGGTCCATTTAAAGGCATGCAACAATGTCATAGGAAAAAAAGTTATCATTTGGTGTTTTTGCTAGTTCCTGTGTTACTATTTGGCACACCTGTGATATGCATGTGTAGGGACTCCATAATAATCAAGTCAAAAGTGAAGAAGAAACTTCAAGCCGTTAGTAACAGATGTGACTTGGAGGATGAAGAAGTGGAAACAAAAGAGATCAAGCATCCAAGAATTTCATATAGACAACTTAGAGAAGCCACTGGAGGGTTCAATGCTTCAAGCCTTATCGGTTCAGGTCAGTTTGGACGAGTTTACAAAGGTGTCCTCCTAGATAATACAAGAGTAGCAGTGAAAGTATTAGATGCAACAAAAGATAATGAGATATCATGGAGCTTTAGAAGGGAATGCCAAATCCTTAAAAAGATAAGGCACAGAAATTTAATAAGGATCATTACAATTTGCAACAAACAAGAATTTAAGGCTATTGTTCTTCCACTGATGTCAAATGGTAGTCTTGAGAGGAACCTATATGATCCAAACCATGAGTTAAGTCATAGGTTAGATGTGATTCAATTAGTGAGGATTTGTAGTGATGTAGCTGAGGGAATGTGTTATCTGCACCATTATTCTCCTGTGAAAGTTGTGCATTGTGATCTTAAGCCTAGCAATATACTACTTGATGATGACTTTACAGCTTTGGTCTCTGATTTTGGAATTTCAAGGCTTCTAAAAGGTGATGCCAATACTTCTACATGTAACTCAACATCTTTCAGTTCAACTCATGGCTTGTTGTGTGGCTCTGTTGGTTATATAGCTCCTGAATATGGAATGGGAAAACAAGCTTCAACTGAGGGTGATGTTTACAGTTTTGGAGTGATTCTGTTAGAAATAGTGACAGGTAAACGCCCTACCGATGTCCTTGTCCATGAAGGCTCTAGCTTACATGAATGGGTTAAGAGACAATACATACAGCCACACAAACTTGAAAACATTGTTGAACAAGCACTTCGAAGGTTCTCTCTTTCTTGTGTGCTAAGGCATGGTAGTAAAATTTGGGAAGATGTTGTTTTGGAATTCATTGAGCTAGGGCTACTCTGCACACAACAAAACCCTTCAACAAGACCAACCATGCTAGATGTAGCACAAGAGATGGGGAGGTTGAAGGATTACCTCAATAATTCTTTCATAAGAGAAGATAATTCAATTGAAAAGTAA 2952 0.3692 MMCFFKQLTMLLFYFLVLVHSRVHDEENIGLMNDKNSLVSFMSYIISDPENALKSWKLTVVHVCDWSGVKCNNESNNKRIIELDLSGKSLGGTISPALANLSLLQILDLSGNLLVGHIPRELGYLVHLEQLSLSWNLLQGDIPLEFGSLHNLYYLDLGSNQLEGEIPPPLLCNVTSLSYIDLSNNSLGGKIPLNNKCIIKELKFFLLWSNKLVGQVPLALSNSTKLKWLDLESNMLSGELPSKIICNFPQLQFLYLSYNNFVSHDGNTNLEPFFASLMNSSNFQELELAGNSLGGRLPHIIGNLPSSLQHLHLEENLIHGSIPPHIANLANLTFLKLSSNRINGTIPHSLCKINRLERMYLSKNYLSGEIPSTLGDIQHLGLLDLSKNKLSGSIPDSFAKLAQLRRLLLHENHLSGTIPPTLGKCVNLEILDLSHNKITGMIPSEVAALTSLKLYLNLSNNELQGILPLELSKMDMVLAIDVSMNNFSGGIPPQLENCIALEYLNLSGNFFEGPLPYTLGQLPYIQSLDISSNQLNGTIPESLQLCSYLKALNFSFNKFSGNVSNKGAFSSLTIDSFLGNNNLCGPFKGMQQCHRKKSYHLVFLLVPVLLFGTPVICMCRDSIIIKSKVKKKLQAVSNRCDLEDEEVETKEIKHPRISYRQLREATGGFNASSLIGSGQFGRVYKGVLLDNTRVAVKVLDATKDNEISWSFRRECQILKKIRHRNLIRIITICNKQEFKAIVLPLMSNGSLERNLYDPNHELSHRLDVIQLVRICSDVAEGMCYLHHYSPVKVVHCDLKPSNILLDDDFTALVSDFGISRLLKGDANTSTCNSTSFSSTHGLLCGSVGYIAPEYGMGKQASTEGDVYSFGVILLEIVTGKRPTDVLVHEGSSLHEWVKRQYIQPHKLENIVEQALRRFSLSCVLRHGSKIWEDVVLEFIELGLLCTQQNPSTRPTMLDVAQEMGRLKDYLNNSFIREDNSIEK* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4834 983 Pfam Leucine Rich repeat 425 440 IPR001611 GO:0005515
Mtr4g4834 983 PANTHER LEUCINE-RICH RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN 24 967 - -
Mtr4g4834 983 Gene3D Phosphorylase Kinase; domain 1 639 744 - -
Mtr4g4834 983 Gene3D Transferase(Phosphotransferase) domain 1 746 982 - -
Mtr4g4834 983 SMART LRR_sd22_2 223 250 - -
Mtr4g4834 983 SMART LRR_sd22_2 149 176 - -
Mtr4g4834 983 SMART LRR_sd22_2 280 306 - -
Mtr4g4834 983 SMART LRR_sd22_2 125 146 - -
Mtr4g4834 983 SMART LRR_sd22_2 329 355 - -
Mtr4g4834 983 SMART LRR_sd22_2 425 446 - -
Mtr4g4834 983 Pfam Leucine rich repeat 355 414 IPR001611 GO:0005515
Mtr4g4834 983 CDD STKc_IRAK 675 966 - -
Mtr4g4834 983 SMART serkin_6 669 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4834 983 Gene3D Ribonuclease Inhibitor 31 196 IPR032675 -
Mtr4g4834 983 SMART LRR_typ_2 149 173 IPR003591 -
Mtr4g4834 983 SMART LRR_typ_2 401 425 IPR003591 -
Mtr4g4834 983 SMART LRR_typ_2 101 125 IPR003591 -
Mtr4g4834 983 SMART LRR_typ_2 377 400 IPR003591 -
Mtr4g4834 983 SMART LRR_typ_2 449 473 IPR003591 -
Mtr4g4834 983 SMART LRR_typ_2 329 353 IPR003591 -
Mtr4g4834 983 ProSiteProfiles Protein kinase domain profile. 669 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4834 983 SUPERFAMILY L domain-like 35 264 - -
Mtr4g4834 983 PRINTS Leucine-rich repeat signature 428 441 - -
Mtr4g4834 983 PRINTS Leucine-rich repeat signature 522 535 - -
Mtr4g4834 983 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Mtr4g4834 983 PANTHER OS04G0122200 PROTEIN 24 967 - -
Mtr4g4834 983 Gene3D Ribonuclease Inhibitor 197 596 IPR032675 -
Mtr4g4834 983 ProSitePatterns Protein kinases ATP-binding region signature. 675 697 IPR017441 GO:0005524
Mtr4g4834 983 SUPERFAMILY L domain-like 335 585 - -
Mtr4g4834 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Mtr4g4834 983 SUPERFAMILY Protein kinase-like (PK-like) 650 961 IPR011009 -
Mtr4g4834 983 Pfam Protein kinase domain 671 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4834 983 ProSiteProfiles Leucine-rich repeat profile. 427 448 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4834 Mtr-Chr4 62498384 62502569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4834 34 968 Receptor kinase-like Gene Family AT3G47570 35.220 8.32e-163 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr4g4834 Pkinase 3.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4834 - - gmx:100792446 1433.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4834 4 62498384 62502569 Mtr4g4834 4 62498384 62502569 ECH