Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4823 ATGCCTCTCAACTTCCTTCTTCTCCTTTTCTTCTTATTCCTCTCCCACCAACCTTTCTCTTCCGCTTCAGAGCCTCGCAACCCCGAAGTGGTTGCTTTGATGAGTATTAAAGAAGCACTAAATGATCCACACAATGTATTAAGCAACTGGGATGAATTCTCTGTTGACCCTTGTAGTTGGGCTATGATTACTTGCTCTTCTGATTCCTTTGTTATTGGCTTGGGAGCTCCTAGTCAATCTCTCTCTGGAACTTTATCTTCATCAATTGCTAATTTAACAAATCTTAAACAAGTGTTACTGCAGAATAACAACATCTCAGGCAAAATACCACCGGAACTTGGAAACCTTCCAAAGCTTCAAACTTTAGATCTTTCAAATAACAGATTCTCTGGGTTCATTCCATCTTCACTCAATCAATTGAATAGTCTTCAGTATATGAGGCTGAACAACAATAGCTTGTCTGGACCCTTTCCTGTTTCACTGTCAAATATCACACAGCTTGCTTTCTTGGACTTGTCTTTTAACAATCTCACTGGACCGTTGCCCAAGTTTCCAGCTAGATCATTCAATATTGTGGGGAATCCATTAATTTGTGTAAGCACCTCTATTGAAGGCTGCTCTGGATCAGTGACCCTTATGCCTGTTCCTTTCTCTCAAGCAATATTACAAGGAAAACACAAGTCCAAGAAACTAGCAATTGCTCTTGGGGTTAGCTTTAGTTGTGTTTCTCTCATAGTCCTGTTTTTGGGGCTCTTTTGGTATAGAAAGAAAAGACAGCATGGAGCCATCTTGTATATTGGTGATTATAAAGAAGAGGCTGTTGTTAGCCTAGGAAATCTCAAACATTTCGGTTTCAGAGAGCTCCAACACGCAACAGATAGTTTCAGCTCCAAGAATATACTTGGTGCTGGAGGTTTTGGCAATGTTTATAGGGGGAAGCTTGGAGATGGCACGTTGGTGGCGGTGAAAAGGTTGAAAGATGTAAATGGTAGTGCGGGCGAGTTACAGTTCCAAACAGAATTGGAGATGATTAGCTTGGCAGTGCACCGCAATTTACTTCGCTTAATTGGATATTGTGCTACTCCTAATGACAAAATTCTGGTTTACCCTTATATGTCTAATGGCAGTGTGGCCTCCAGGCTTAGAGGAAAACCCGCTTTAGATTGGAACACAAGAAAGAGGATAGCAATTGGAGCTGCTCGGGGCCTTCTGTATCTTCATGAGCAATGTGATCCAAAAATCATACACAGAGATGTAAAAGCTGCTAATGTGCTTCTGGATGATGATTATGAGGCTATCGTTGGTGATTTTGGCCTTGCAAAGCTCCTTGATCATGCTGATTCTCATGTCACCACTGCTGTACGTGGCACTGTTGGACACATTGCACCGGAGTACCTCTCGACTGGCCAATCATCTGAGAAAACTGATGTGTTTGGATTCGGCATTCTCTTATTAGAGCTTATAACCGGAATGACAGCCCTTGAGTTTGGGAAAACCTTGAATCAAAAAGGTGCTATGCTAGAGTGGGTTAAAAAAATACAGCAAGAAAAGAAGGTTGAAGTTTTGGTGGACAAAGAACTAGGGAGCAACTATGATAGAATAGAGGTTGGGGAAATGCTTCAAGTAGCTTTGCTTTGCACCCAATATATGACAGCTCACCGGCCGAAAATGTCCGAAGTGGTCCGGATGCTTGAAGGAGATGGACTTGCTGAGAAGTGGGCATCGACACATAATTATGGAAGTAACTGCTGGAGCCATAGTCACAGCAACAACAGTAGTAGCAATAGCTCATCTCGTCCTACCACTACTTCAAAACATGATGAAAATTTTCATGATCGTTCAAGCATGTTTGGCATGACCATGGATGATGATGATGATCAGTCTTTGGATTCCTATGCCATGGAACTCTCTGGCCCTAGATAA 1923 0.4217 MPLNFLLLLFFLFLSHQPFSSASEPRNPEVVALMSIKEALNDPHNVLSNWDEFSVDPCSWAMITCSSDSFVIGLGAPSQSLSGTLSSSIANLTNLKQVLLQNNNISGKIPPELGNLPKLQTLDLSNNRFSGFIPSSLNQLNSLQYMRLNNNSLSGPFPVSLSNITQLAFLDLSFNNLTGPLPKFPARSFNIVGNPLICVSTSIEGCSGSVTLMPVPFSQAILQGKHKSKKLAIALGVSFSCVSLIVLFLGLFWYRKKRQHGAILYIGDYKEEAVVSLGNLKHFGFRELQHATDSFSSKNILGAGGFGNVYRGKLGDGTLVAVKRLKDVNGSAGELQFQTELEMISLAVHRNLLRLIGYCATPNDKILVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDDYEAIVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTLNQKGAMLEWVKKIQQEKKVEVLVDKELGSNYDRIEVGEMLQVALLCTQYMTAHRPKMSEVVRMLEGDGLAEKWASTHNYGSNCWSHSHSNNSSSNSSSRPTTTSKHDENFHDRSSMFGMTMDDDDDQSLDSYAMELSGPR* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4823 640 MobiDBLite consensus disorder prediction 584 640 - -
Mtr4g4823 640 SUPERFAMILY Protein kinase-like (PK-like) 277 565 IPR011009 -
Mtr4g4823 640 ProSiteProfiles Protein kinase domain profile. 295 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4823 640 Gene3D Phosphorylase Kinase; domain 1 266 371 - -
Mtr4g4823 640 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 640 - -
Mtr4g4823 640 Gene3D Ribonuclease Inhibitor 26 208 IPR032675 -
Mtr4g4823 640 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Mtr4g4823 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Mtr4g4823 640 SUPERFAMILY L domain-like 27 199 - -
Mtr4g4823 640 Pfam Protein tyrosine and serine/threonine kinase 298 564 IPR001245 GO:0004672|GO:0006468
Mtr4g4823 640 SMART serkin_6 295 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4823 640 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Mtr4g4823 640 Gene3D Transferase(Phosphotransferase) domain 1 372 582 - -
Mtr4g4823 640 MobiDBLite consensus disorder prediction 584 603 - -
Mtr4g4823 640 MobiDBLite consensus disorder prediction 604 620 - -
Mtr4g4823 640 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 5 640 - -
Mtr4g4823 640 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4823 Mtr-Chr4 62401079 62406232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4823 4 640 Receptor kinase-like Gene Family AT5G16000 63.060 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mtr4g4823 PK_Tyr_Ser-Thr 1.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4823 - - gmx:100797186 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4823 4 62401079 62406232 Mtr4g4823 4 62401079 62406232 ECH