Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4781 ATGGGATCTTCCTTGAGTTGTTGTGGCTCAGAGAAGGTTGATGAAGTGCCAACATCATATGGTGTAGCTAACAATTCTTGGAGAATTTTCACATACAAGGAGTTGCATACAGCTACAAACGGGTTCAGTGATGATTATAAGCTTGGTGAAGGTGGGTTTGGGAGTGTCTATTGGGGAAGAACCAGTGATGGGCTACAGATAGCAGTGAAGAAACTGAAAGCAATGAACTCAAAGGCAGAGATGGAATTTGCTGTAGAAGTTGAAGTGCTTGGAAGGGTTAGGCACAAAAATTTGTTAGGTCTAAGGGGCTATTGTGTTGGCGATGATCAAAGGCTTATTGTCTATGATTACATGCCAAATCTAAGTCTGCTTTCTCATCTCCATGGTCAATATGCTGGTGAAGTGCAACTCAACTGGCAAAAGAGAATGAGCATTGCAATTGGCTCTGCTGAAGGCATTTTGTACTTGCACCATGAGGTCACACCCCACATCATTCATAGAGACATCAAGGCAAGTAATGTTTTGCTTGATTCAGATTTTGTGCCTCTAGTTGCTGATTTTGGTTTTGCAAAGCTAATACCAGAAGGAGTTAGTCACATGACAACCAGGGTTAAGGGTACCTTAGGATACTTAGCACCTGAGTATGCTATGTGGGGAAAAGTTTCTGAAAGCTGTGATGTCTATAGTTTTGGAATTCTTCTATTAGAGCTAGTAACTGGTAGAAAGCCCATAGAGAAGTTACCTGGTGGGCTTAAGAGAACAATAACTGAATGGGCTGAGCCTTTGATAACCAAAGGAAGGTTTAGGGATATGGTTGATCCAAAACTCAGAGGAAACTTTGATGAAAATCAAGTTAAACAGACAGTTAATGTAGCTGCTCTTTGTGTGCAAAGTGAGCCTGAGAAACGACCAAACATGAAGCAAGTTGTTAGTCTTTTGAAAGGACAAGAACCTGATCAAGGGAAAGTGACTAAGATGAGAATTGATAGTGTCAAATATAATGATGAATTACTGGCACTTGATCAACCTAGTGATGATGATTATGATGGAAACAGCAGCTATGGTGTTTTTAGTGCTATTGATGTCCAAAAGATGAAAGATCCTTACAAGAAAATTGGCTAA 1122 0.4029 MGSSLSCCGSEKVDEVPTSYGVANNSWRIFTYKELHTATNGFSDDYKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCVGDDQRLIVYDYMPNLSLLSHLHGQYAGEVQLNWQKRMSIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFVPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGLKRTITEWAEPLITKGRFRDMVDPKLRGNFDENQVKQTVNVAALCVQSEPEKRPNMKQVVSLLKGQEPDQGKVTKMRIDSVKYNDELLALDQPSDDDYDGNSSYGVFSAIDVQKMKDPYKKIG* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4781 373 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4781 373 SUPERFAMILY Protein kinase-like (PK-like) 23 313 IPR011009 -
Mtr4g4781 373 PANTHER OS01G0750732 PROTEIN 1 373 - -
Mtr4g4781 373 Gene3D Phosphorylase Kinase; domain 1 14 117 - -
Mtr4g4781 373 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 1 373 - -
Mtr4g4781 373 Pfam Protein tyrosine and serine/threonine kinase 47 313 IPR001245 GO:0004672|GO:0006468
Mtr4g4781 373 CDD STKc_IRAK 48 315 - -
Mtr4g4781 373 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Mtr4g4781 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Mtr4g4781 373 Gene3D Transferase(Phosphotransferase) domain 1 118 331 - -
Mtr4g4781 373 ProSiteProfiles Protein kinase domain profile. 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4781 Mtr-Chr4 61851503 61853458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4781 1 364 Trihelix Transcription Factor Family AT1G70460 42.857 2.26e-95 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Mtr4g4781 PK_Tyr_Ser-Thr 4.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4781 - - gsj:114393039 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4781 4 61851503 61853458 Mtr4g4781 4 61851503 61853458 ECH