Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4775 ATGGTGTCTCCCAAAAACATAGGAAAATATAGACTTGGCAGGACAATAGGAGAAGGTACATTCTCTAAGGTAAAGATTGCTTTAAATAGCAACAATGGTGAGAAGGTAGCAATCAAGGTCATTGACAAACAAATGGTCTTGAAAAACAATCTAAAACATCAGGTACAAAGTGAGATTAGAACAATGAAACTTCTACATCATCCAAATATAGTTAGAATTCATGAGGTTATTGGCACAAAAACAAAAATATACATTGTGATGGAATATGTATCAGGAGGTCAACTATTGGACAAAATATCCTATTGCAACAAGTTGAATGAATGTGAGGCAAGAAAACTATTCCAACAACTTATTGACGCCGTCGACTACTGCCATAACAAGGGAGTTTATCACCGCGATCTCAAGCCAGAAAACTTGCTCCTAGACAGCAAGGGAAATCTAAAAGTGTCTGATTTTGGATTAAGTGCACTGAATAAGCCTAATAATGTCCTAAACACAAAGTGTGGATCCCCGTGTTACGTGGCTCCTGAGCTGCTGATGAGCAAAGGGTATGATGGAGCATCTGCTGATGTTTGGTCATGTGGGGTGATTCTTTTTGAGTTACTTGCCGGTTTTCTACCATTTGATGACCAGAACTTGATAAATTTATACCATAAGATATGCAGAGCGGAATACGTATGTGCCCCTTGGTTTACTCAAAGTCAAAAGAAACTAATTGCGAAAATACTTGAACCGCATCCTGGAAAGCGGATAACTATTTCGGGTATTATTGATGATGAGTGGTTTCAAACAGATTATAAGCCTATTTGTGCGTATGAATTTGATCCGATCATTAACTTGGATGATGATAGTTGTGCTTTCAATTCAATTGAGGAGAAAACTACAAAGCCAAGGATAACCAAGTCTTCAAGCTTCATTAACGCGTTTCAACTGATAGCCATGTTTCAGGACTTTGATTTATTCACCCTTTTTGAAGAACAGGATCACATGAAGCAGACAACAAGGCTTGGATCCCAACATACAATCACTGAAACCGTCGAAAAAATAGAAGCTGCTGCAGCAGATGTTAGACTGTCAGTAAAAAAAATGAACAACTTTAAGATGAAAATGCACTCGAAAGAGACAATGACGAGGTGTTCTAGATCATACTTTGACATATCAGCTGAGGTGATTGAAGTTGCTCCGGCTCATTGTGTTGTACAAGTATCAAAATCTGTAGGAGATCTAAGAATGTATAATGAGTTTTGTGAAAGTTTATCAAACCTGCTGAAAGACGAATCTAGTATTCCACCACACGGCCAAGACTCTGTGGATCGATGCGACACTGGCAGCGTAGAAAAGCAAGATGCTGAATGGTTGGTGGATCTCTAA 1371 0.3866 MVSPKNIGKYRLGRTIGEGTFSKVKIALNSNNGEKVAIKVIDKQMVLKNNLKHQVQSEIRTMKLLHHPNIVRIHEVIGTKTKIYIVMEYVSGGQLLDKISYCNKLNECEARKLFQQLIDAVDYCHNKGVYHRDLKPENLLLDSKGNLKVSDFGLSALNKPNNVLNTKCGSPCYVAPELLMSKGYDGASADVWSCGVILFELLAGFLPFDDQNLINLYHKICRAEYVCAPWFTQSQKKLIAKILEPHPGKRITISGIIDDEWFQTDYKPICAYEFDPIINLDDDSCAFNSIEEKTTKPRITKSSSFINAFQLIAMFQDFDLFTLFEEQDHMKQTTRLGSQHTITETVEKIEAAAADVRLSVKKMNNFKMKMHSKETMTRCSRSYFDISAEVIEVAPAHCVVQVSKSVGDLRMYNEFCESLSNLLKDESSIPPHGQDSVDRCDTGSVEKQDAEWLVDL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4775 456 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4775 456 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Mtr4g4775 456 PANTHER SERINE/THREONINE KINASE 6 426 - -
Mtr4g4775 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Mtr4g4775 456 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4775 456 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Mtr4g4775 456 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4775 456 Pfam NAF domain 304 362 IPR004041 GO:0007165
Mtr4g4775 456 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED 6 426 - -
Mtr4g4775 456 Gene3D Transferase(Phosphotransferase) domain 1 90 274 - -
Mtr4g4775 456 Gene3D Kinase associated domain 1, KA1 301 426 - -
Mtr4g4775 456 CDD CIPK_C 307 425 - -
Mtr4g4775 456 SUPERFAMILY Protein kinase-like (PK-like) 7 276 IPR011009 -
Mtr4g4775 456 ProSitePatterns Protein kinases ATP-binding region signature. 16 48 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4775 Mtr-Chr4 61780411 61786252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4775 2 425 CBL-interacting serine-threonine protein kinases AT1G01140 48.148 8.82e-145 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mtr4g4775 Pkinase 8.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4775 - - mtr:MTR_4g128820 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4775 4 61780411 61786252 Mtr4g4775 4 61780411 61786252 ECH